Gene Daci_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1708 
Symbol 
ID5747266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1899744 
End bp1900880 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content57% 
IMG OID641296789 
Producthypothetical protein 
Protein accessionYP_001562736 
Protein GI160897154 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.810296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.250764 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTAA CAGCCTTCTC AATTACTCGC ACCGGCGAGT TCGACGTCGA CCAAATTCTG 
GAAAAACTTA GTGCAGAAAC AGGCCATGCC TACATGTCCG TTGAGAGAAT TCCTGATGAG
TGGCGAGCCC ATCTTCGCGC TGATCTCAAG TGCCCAGACT GCTCGGTGAC AGGGGCCGAG
GTTGTTCGTT CCGTCGTCGC GGGCAAGTCC GGTAAGCCCA AAAGGCAGTC ATTCTTCAGA
TTCACGACAC CAGGTCACCA CCCCTTTTGC GACTACGCCA ACCCAGATGC GACGAATGCC
GTACCCGAAA CCCTAGTAGC TTTCAGTGAG TCACGGTCGA ATCTGACGCG AGCGGTGAGG
GATCTTGTGT GCACCGGGAT CGAGGTAGGC AGCTTCAGCC AAGGTTCCAT TCGTTCCATG
CGGGATTGGT TTTTCAACAA GAAGGTCGAG TCGATGTTTG TGGTCTCCCT AGACCCGCGA
ACGTATCCGT GGATCGATGC ACTGCGGGAG AACGCATTTC ACGCTCGCGG CGCCTTGCCG
ACGGATGTAG AGATCACGCC AGAGATCGCC GAACTGCCCA ACTTTAACTG GAGGGCCCAG
GCAGCTCGCC TAGTTCAAGC CCGCTATCCC CAGCACCAGG CGAACATGCG CGCTTTGATA
GACCAGCACA TTGGCCTGTT CGGCGCGAGC GGAAAGCGGT CGGAGAGCTT GGCCAGGCGC
TACGCCGGCA GGCCAGTTTT CAACCCTACG GTGCTGGCCT CCGAATATAG GAAGACCCTG
GCCTTGTCGG AATTCATCGC TCATACGCAC CCCCCATTGA ATGCGGTCAA AGACACTAGT
TCGAGCACGG GCAGTGTGCT CGCCTTGTCA GCATTGCTGC TGTTCGGACG AGACTGGGAT
ATCAGCAAGG CGATCGCAGA TTTCGCCAAG ATCTCACCGG CGGTGGGTAC TGCAGACCAG
CAGCTCGGGA ACGTAATGGG ATTGAACCCT TTCCACGACT ACGAAGCCTG GGCCGCACTA
AAAAAGCTGC AGGACCTGAA CATCCAGGTG CCGAAAGACA TCGACATCAA GGCCGAGCGA
GTCGTGGTGG AGGCGGCATT ACGTGCGAAG TTCGGTGTAT CGCCGCCCGG CGATTGA
 
Protein sequence
MTLTAFSITR TGEFDVDQIL EKLSAETGHA YMSVERIPDE WRAHLRADLK CPDCSVTGAE 
VVRSVVAGKS GKPKRQSFFR FTTPGHHPFC DYANPDATNA VPETLVAFSE SRSNLTRAVR
DLVCTGIEVG SFSQGSIRSM RDWFFNKKVE SMFVVSLDPR TYPWIDALRE NAFHARGALP
TDVEITPEIA ELPNFNWRAQ AARLVQARYP QHQANMRALI DQHIGLFGAS GKRSESLARR
YAGRPVFNPT VLASEYRKTL ALSEFIAHTH PPLNAVKDTS SSTGSVLALS ALLLFGRDWD
ISKAIADFAK ISPAVGTADQ QLGNVMGLNP FHDYEAWAAL KKLQDLNIQV PKDIDIKAER
VVVEAALRAK FGVSPPGD