Gene Daci_1692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1692 
Symbol 
ID5747250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1882120 
End bp1882866 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content66% 
IMG OID641296773 
Productfatty acid hydroxylase 
Protein accessionYP_001562720 
Protein GI160897138 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTG CCCAAGCCTT CACCGAACTC AACGCCTGGC AGGTCATGGC CTGGGGCCTG 
CTCTTCTTCG GCGTGCTGTA CACGGCCGGC GGCTGGGGCA TGACGGCGCT CACGCGCTGG
CTGCAGCGGC GCGGCGTGGG CCGCGTGCTG GACACGCGCC CGCTCAAGCC CGACCAGTTG
CGCCGCGAAT GGCGCCAGTC GCTGCATTCG GTGCTGATCT TCGGCATCGG CATGATCGTG
CCCTGGGGCC TTCTGCAATT GGGTTGGGCG CGGCTGGAGC CCGATGCAGG CCCCTGGCGC
ATTGCCATCG AAATCGTGGT GCTGCTGATC TGGAACGATG TGCATTTCTG GATCAACCAC
CGCCTGCTGC ATACGCGGCT GCTGGGGCGC TTTCATGGTG ACCACCACCG CTCCATCGTC
ACCACGCCGT GGTCCACCTA CAGCTTTCAC CCAATCGAGG CGCTGATGCT GGGCAACGTC
ATCCTGCTGC CCATGGTGGT GCACGACTTC AGTTTCTGGT CGCTGGCCTC GGTGCCGGTG
CTCAGCCTGC TGCTGAACGT CATAGGCCAC TCCAACTACG ACTTCTTTCC CGGGGTGTCC
GACACGCATG CGCTGGCCGC CAGCCGACGC CACCATCTGC ACCATGCCCG GCCCAATGGC
AACTACGGCT TTGCGCTGGC CTTCATGGAC CGGCTGATGC GCACGCGCGT GGCACTGCCC
GCCACGGCCC GGCCCAGGAC GGAATGA
 
Protein sequence
MTAAQAFTEL NAWQVMAWGL LFFGVLYTAG GWGMTALTRW LQRRGVGRVL DTRPLKPDQL 
RREWRQSLHS VLIFGIGMIV PWGLLQLGWA RLEPDAGPWR IAIEIVVLLI WNDVHFWINH
RLLHTRLLGR FHGDHHRSIV TTPWSTYSFH PIEALMLGNV ILLPMVVHDF SFWSLASVPV
LSLLLNVIGH SNYDFFPGVS DTHALAASRR HHLHHARPNG NYGFALAFMD RLMRTRVALP
ATARPRTE