Gene Daci_1672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1672 
Symbol 
ID5747230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1864153 
End bp1865055 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content72% 
IMG OID641296753 
Productbiotin synthesis protein BioC 
Protein accessionYP_001562700 
Protein GI160897118 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.724893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCACG AATTGCCCCC CACCATCGAT CCGGCCGCCG CATTGCGCTG GCAGCAGGCC 
GCGCCTGCGG CCTCGCCGTG GCTGCATGAG GAGGTGGCGC GCCGCATGCA GGAGCGGCTG
GACTGGATCG TCAAGCCGCC CCAGCGCTGG TGCCACTGGC AGCCCGTGCG CGGCGGCCTG
CAGGCCCATG CGCTGCTGCG CCAGCGCTAT GCGCAGTCCG AATGCCTGGT CTATGAAGCC
TCGCCGCTGC ACGAGGCCGC AGCCCGCGAG CAGCTGGGCG CGCGCTGGTG GCAGCCCGCG
CGCTGGACCG GGGGCGCCAC GCGCTTCGGC GAGCCCGAGC CTGCCGGCGT GGACATGCTG
TGGGCCAACA TGGCCCTGCA CCAGCAGGCC GACCCGCAGG CGCTGATCAC GCGCTGGCAC
CAGGCGCTGT CCGTGGACGG CTATGTGATG TTCTCCTGCC TGGGGCCCGA TACGCTGCGC
GAGCTGCACG CCATCTACGC CCAGCTGGGC TGGCCGCCCG CCGGCCAGGC CTTCACCGAC
ATGCATGACT GGGGCGACAT GCTGGTGCAC GCAGGCTTCA GCGAGCCGGT GATGGACATG
GAGCACATCA CGCTGACCTT TGCCACGCCC GAGCGGCTGC TGCAGGAGCT GCGCGAGCTG
GGCCGCAACT TCCATCCACA GCGCTTTGCC GCGCTGCGCG GCCGCCGCTG GCAGCAGCGC
CTGCACGATG CCCTGCGCGA GCGCCTGGCC GGCCCCGACG GGCAGCTGGC GCTGACCTTC
GAGATCGTCT ACGGCCACGC CTACAAGCCG CAGCCGCGCG TGCGCCTGGA GTCCAGCAGC
GCCGTATCGC TGGAGGACAT GCGCAGCATG CTGCGCCAGC CGCGCAACAC GGGTTTGCGA
TAG
 
Protein sequence
MSHELPPTID PAAALRWQQA APAASPWLHE EVARRMQERL DWIVKPPQRW CHWQPVRGGL 
QAHALLRQRY AQSECLVYEA SPLHEAAARE QLGARWWQPA RWTGGATRFG EPEPAGVDML
WANMALHQQA DPQALITRWH QALSVDGYVM FSCLGPDTLR ELHAIYAQLG WPPAGQAFTD
MHDWGDMLVH AGFSEPVMDM EHITLTFATP ERLLQELREL GRNFHPQRFA ALRGRRWQQR
LHDALRERLA GPDGQLALTF EIVYGHAYKP QPRVRLESSS AVSLEDMRSM LRQPRNTGLR