Gene Daci_1671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1671 
Symbol 
ID5747229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1863329 
End bp1864063 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content73% 
IMG OID641296752 
ProductComF family protein 
Protein accessionYP_001562699 
Protein GI160897117 
COG category[R] General function prediction only 
COG ID[COG1040] Predicted amidophosphoribosyltransferases 
TIGRFAM ID[TIGR00201] comF family protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAACC TGCCTGCGTC ATGGCTTTCG CACTGGCATG CCGGCCTGCC CAGCCAGTGC 
GCCGTCTGCC GCCGCTGGCC GGCGCAGCGC CTGTGCCAGG ACTGCCGCTT GCGCTGGGCC
AGGCCGCTGC CGCGCTGCGG GCTTTGTGCC ATGCCGCTGC CAGCGGGGCA CGGCGCCAGC
GGCGGCCAGC AGGTCTGCGG CGCCTGCCTG GTCAAGCCCC CGCCACTGAC GCACTGCCTT
GCCGCGCTGG ACTACGCCTA TCCCTGGCAC ACGGTGATCG GCGACTTCAA ATTCCGGGGA
GACACCGGCC TGGCACGCAG CCTGGCCGCC CTGCTGCTGG AGCAGCACGG GGCCCGCGAG
CAGCTGGAGC AATGCGATCT GCTACTGCCC ATGCCCCTGT CTGCCCAGCG CCTGCGCGAA
CGCGGCTTTC ACCAGGCCCT GGTGCTGGCC CGTGCGCTGT CCGGCCCATC CACCCGCGGC
AAGCTGCGGC ACCAGGCCGT GCAGCGCGCC CACACGGCAC AGGCCCAGCA TGACCTGCCG
CGCGCCCTGC GCCTGCGCCA GCTGCGCGGG GTCTTTGCGG TGCCGCCGGC GCAACTGCCC
CATGTGCGCG GCCGCAGGGT CCTGCTGATC GACGATGTGA TGACCACGGG TGCCAGCCTG
CATGCGCTGG CCACCTGCCT GCGGCGTGCA GGCGCGGCCG AGGTCAGCGC CCTGGTGCTG
GCGCGCACGC CCTGA
 
Protein sequence
MPNLPASWLS HWHAGLPSQC AVCRRWPAQR LCQDCRLRWA RPLPRCGLCA MPLPAGHGAS 
GGQQVCGACL VKPPPLTHCL AALDYAYPWH TVIGDFKFRG DTGLARSLAA LLLEQHGARE
QLEQCDLLLP MPLSAQRLRE RGFHQALVLA RALSGPSTRG KLRHQAVQRA HTAQAQHDLP
RALRLRQLRG VFAVPPAQLP HVRGRRVLLI DDVMTTGASL HALATCLRRA GAAEVSALVL
ARTP