Gene Daci_1657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1657 
Symbol 
ID5747215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1846435 
End bp1850766 
Gene Length4332 bp 
Protein Length1443 aa 
Translation table11 
GC content72% 
IMG OID641296738 
Producthypothetical protein 
Protein accessionYP_001562685 
Protein GI160897103 
COG category[S] Function unknown 
COG ID[COG2911] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGATT CCCGTTTGAA TACCCCTGCC TCCTCCGCCG CGCCAGATCA AAGCCCCCAG 
GCGTCCCCTC CCCCGCCTGC GCCCGCGCCC CGGCGCCGCC GCCGCTGGCT GCGCGCCCTG
CTCTGGTTCT TCCTGGTCCT GGTCCTGCTG CTGGCCGCCC TGCTGAGTTC CGCATGGTGG
TGGGCCGGCC GTGCCGATTC GCTGGCCTAC ACCCTGCAGC GCGTGGCCGG CTGGCTGCCC
GCAGGCCAGA GCCTGCAGGC CAAGGAAGTC ACCGGCACCG TGCGCCAGGG CGGGCGCATC
GGCTGGCTGC AATGGCAAAG CCCCACCATG AAGGTGGAGC TGCGCGACGC CACCATCGGC
TGGCAATTGC GCCCCCTGCT GTCGCGCACC GTGCGCCTGG GCGAAGTGCG CATCGCCGAG
CTGAGCATTG CCAGCACCCC CGACCCCGAG GACAAGAAAC CCGTCGAGCC ACTGCAGCAG
CTCGTGCTGC CCGTGAAGAT CGACGTGCCC TTCCATGTGG AGCGCATCGT CTGGCAAGGC
CCGCCCCAGG CCGAGGTGCT GGGCCTGCAA GGCCACTACG TCTATGACGG CAGCGAGCAC
CAGCTGGACG TGCGCGACCT GCAATGGGCC GATGGCAACT ACCAGGCCAG GCTGCGCCTG
CAGGCCCGTG CACCCATGGC CATCCAGGCC CAGCTGCAGG GCGACCTGCA GGCGCCGGCC
CTGGCTTCGG ACGACGAGGC CTCCACGGCC AAGGCCCCCA AACCGGCACC GCTGGCCGTG
CAGGCCAAGG CACAGATCGA CGGCACCCTG GCCACCGCCG CTGCGCAACT GGGCATCAAG
CTCCAGGTTG ATGCCAAGCC CGGGATGGTG TCCGAGGAAA CGCCTGCCCC TGCCGCCGTA
CAGAAATCCG CCAAGGCCGA TGGCAAGAAT GGCAAGGCCA GGGAGCGCAA GGAAGCCGCC
CCCGTGTCCG AACCCATGCA TGCGGACATC GAGGCCAGCA TCCGGCCCTG GCAGCCCCAG
CCGCTGCAGA CCGCGCGCGC CCAGCTCAGC CAGATCGACA TCGCCGCCTT CTGGCCCCAG
GGACCGCGCA CCCGCATCAG CGGCGAATTG CAGGCAGGGC CGGATGGCAA GGCAGCTGAT
ACAGCCCGGG CACCAGCCAC GGAACAGGCA TCGGACCAGG CACCAGGCTC GGCCATCGCC
ACCACCGCCT GGCAGCTGAC GACACGCCTG AACAACGCCA TGCCCGGTCC CTGGGACCGC
CAGCGCCTGC CGCTGGACCA GATCGAGGCC GCGGTGCGCT ATGACGGCCA GCAGTGGCTG
CTGGAGCAGG CGCAGATCGC CATAGGCTCG GGCAGCATCG ACGCCCAGGG CCGCTTCGAG
CCCGCCACCA AGGTCTTCGA AGGCCAGGCC AAGGTCCAGC GCCTGGACCC CGCCGCGCTC
TACAGCATCC TGGAAGCCGC ACCGCTGCAG GGCGAGCTGC GCGCCAGCAC CACGGCCGAG
CAGCAGGTGG ACTTCAGCGT GGACATCCAG GCCGCAGCCG CGCCCGCAGG CGGCAAGCGC
CAGCCCCTGC GCATAGAGAA ACTCGCCACC AAGGGCCGCT GGGCCCAGCC CGTGCTGTCG
CTGGAGAACC TGCAGCTTGA TGCGCTGCAG GCCTCGGTGC GCAGCCGCAG CCTGCAGTTC
GACACCGAAC AGCAAAAACT GCAGACCGTG CTTAAGGCCG AGCTGCCCGG CGCCGAGCTC
TCGCTGGACG GCCACATCAG CCCCGCCGCA GGCCAGGGCA GCAGCCAGCT CAAGCTGTCG
TCACTCACCG CCCTCACACA GTGGCTGCGC AAGCTGCCCG GCATGAAGGA CCCGCTGGCC
GGCGCCCTGG TCGAAGGCCA GGCCCAGCTG GACGCCAGCT GGCGCGGCGG ATGGGGCGCA
CTGCAAAAGC GCATGAAGGC CGCCGTGGGC GACCCGCTTC CCGCCAGCGG CCTGCAACTG
CAGGCCGACC TGCAGGCCGC CAAGCTGCGC TACCTGCCCG CCAACACGCC GCCCGAGCAG
GCGCTGGAGC TGCCCGAACT GCGCCTGGCA CTCAAGGGCT CGCCCGAGCA GGCCAGCCTG
ACCCTCACCG GCCAGGCGAA GCGCGGCACG CAGACCGCGC AGATCGACAC GGCCCTGCAG
GCCGGCCTTG CCACGGCGCG CGGTGCCGCG CCCCTGGACT GGCAGGCCAG CATCGACAGA
CTGCAGGCCC GGTTGAATCC AGGCCAGGAC CTGCCCGGCC CGTGGCAGGT GCAACTGGCG
GGCAAGCAGC CCGTGCAGAT CGCCCAGCGC ACCACGGGCC GTACCGTGCT GTCCACCACG
TTCACGGCGT CGGCCGGCAG CCTGCAGGTC ACGCCGCCCA CGCTGGCCCA GCGCCGCGCC
AATGCCGAGG CGCCGCAGCC CGTGCTGCTG GCCTGGGACG ACACCCGCGC CACCCAGGGC
GGCGACGGCC GCTGGGCCCT GCGCAGCACC GGCCGCGCCC AGGCCCTGCC GCTGGCCTGG
GTTGATGCCC TGTCCATGGC CGAGGAGCCT CCGCTGGCCG CCATGGGCCT GAGCGGCGAT
CTGAGCTTCA ACGCCCGCTG GGACCTGGAC ACCACCGGCC CCGCGCTCAA GGCCGAACTG
CTGGTCGAGC GTGCCGCCGG CGACCTGCGC CTGGCCGTGG AAGACGGCTC GGGCACCACC
GTCATCCACA CCACGGGGCC GCGCTCCAGC AAGCCTGGTG AAGTGCGCAC GCATACCGTG
CGCGGCGCCG GCATGCGCGC CCACATCAAG CAGGCCCGCC TGAGCGTGCG CGCCCAGGGC
GACGACGTGC AGGCCAAGCT CGACTGGGAC AGCGAACGCG CCGGCACCCT GACTGCGCAG
CTGGGCACGC GCCTGGCCCA GCAAAACGGC ACCTGGACCT GGCCCGAGAA GGCCCCGCTG
TCCGGCCAGA TCGACGCCCG CATGCCCGAC ATCGGCATCT GGGCGCTGTT CGCCCCGCCC
GGCTGGCGCG TCACCGGATC GCTGCAGGCC AAGGCCGAGA TCAGCGGCGA CCGCCAGAAC
CCGCAGTGGC AGGGCAATCT CTCGGCCGAC GGCCTGAGCA TCCTGTCCGC GCTGGACGGC
ATCGACCTGC AAAACGGCGT GCTGCGCGCC CGCCTGCAAG GCAACCGGCT GGACCTGACC
GAACTGCGCA TGCAGGGCGG GCGCGGCAGC AATGCGCGCA TCCTGGGCTA CAGCGGCAAC
CTCACCACGG CCCCGCGCGA AGGCGGCGAA CTCACGGGCT CGGGCTTCGT GCGCTGGGAC
CCGCCCAACG CCGATGGCAG CAACTCCGGC CTGAGCATGG ACCTGCGCGC CCAGGCCACC
AGGCTGCAGG TGCTGGTGCG CGCGGACCGC CAGGTCAGCA TCTCCGGCGG CCTGCAGGCC
AAGCTGGAGC AAGGCCAGTT CACGCTGCGC GGCGACCTCA CCACCGACCG CGCCACCATC
ATCCTGCCCG AGGAATCCGC CCCCTCGCTG GACTCCGACG TGGTCGTGCA CTCGGCCGCC
TCGCGCAAGG CCGAGCAGGA AGCGGCGCGC AAGCAGCAGC AGGCCGACCG CAAGGCCCAG
GCCCGCGCGG AAACCATCAA GCTGCCCGAC ATCCTCGTCA AGCTCGACCT GGGCCGCGAC
TTCGCGCTGC AGGGCTACGG CATCACCACC CGCCTGGAAG GCGCGCTGGA AGTGCAAGGC
CCCACCGTGG CGGGCGGCCC GCCGCGCATC ACGGGCGAGA TCCGCACCGT GCAGGGCCGC
TACCGCGCCT GGGGCCAGTC GCTGGACGTG GAGACCGGCC TCATCCGCTT CAACGGCCCC
TACGCCAACC CCTCGCTGGA CATCCTGGCG CTGCGCCCCA ACATCGCCGT GCGCGCAGGC
GTGCAGGTGC AGGGCACGGC CAATGCCCCG CGCGTGCGCC TGTACTCCGA CCCCGAAATG
CCCGATGCCG AAAAGCTCTC CTGGGTGGTC ATGGGCCGCG ACCCCGCCAC GGGCGGCGCC
GAAAGCGCCC TGCTCCAGCA GGCCGCGCTG TCCCTGCTCA GCGGCGGGCG CAACAACAGC
GGCAAGATCG CCAGCAACCT GGGCCTGGAC GAGATCGGCT TCAAGGGACC GGGCGGCGAA
GGCTCCACCG GCGCCGCCCT CACCCTGGGC AAGCGCCTGT CCAGCGACCT CTATGTCACC
TACGAGCAAA GCCTCTCGGG CGCCATGGGC ACGCTGTACA TCTTCTACGA CCTCTCGCGC
CGCCTCACCC TGCGCGGCCA GACCGGGGAA ACCAGCGCGC TGGACCTGAT CTACACCGTG
CGCAAGGACT GA
 
Protein sequence
MVDSRLNTPA SSAAPDQSPQ ASPPPPAPAP RRRRRWLRAL LWFFLVLVLL LAALLSSAWW 
WAGRADSLAY TLQRVAGWLP AGQSLQAKEV TGTVRQGGRI GWLQWQSPTM KVELRDATIG
WQLRPLLSRT VRLGEVRIAE LSIASTPDPE DKKPVEPLQQ LVLPVKIDVP FHVERIVWQG
PPQAEVLGLQ GHYVYDGSEH QLDVRDLQWA DGNYQARLRL QARAPMAIQA QLQGDLQAPA
LASDDEASTA KAPKPAPLAV QAKAQIDGTL ATAAAQLGIK LQVDAKPGMV SEETPAPAAV
QKSAKADGKN GKARERKEAA PVSEPMHADI EASIRPWQPQ PLQTARAQLS QIDIAAFWPQ
GPRTRISGEL QAGPDGKAAD TARAPATEQA SDQAPGSAIA TTAWQLTTRL NNAMPGPWDR
QRLPLDQIEA AVRYDGQQWL LEQAQIAIGS GSIDAQGRFE PATKVFEGQA KVQRLDPAAL
YSILEAAPLQ GELRASTTAE QQVDFSVDIQ AAAAPAGGKR QPLRIEKLAT KGRWAQPVLS
LENLQLDALQ ASVRSRSLQF DTEQQKLQTV LKAELPGAEL SLDGHISPAA GQGSSQLKLS
SLTALTQWLR KLPGMKDPLA GALVEGQAQL DASWRGGWGA LQKRMKAAVG DPLPASGLQL
QADLQAAKLR YLPANTPPEQ ALELPELRLA LKGSPEQASL TLTGQAKRGT QTAQIDTALQ
AGLATARGAA PLDWQASIDR LQARLNPGQD LPGPWQVQLA GKQPVQIAQR TTGRTVLSTT
FTASAGSLQV TPPTLAQRRA NAEAPQPVLL AWDDTRATQG GDGRWALRST GRAQALPLAW
VDALSMAEEP PLAAMGLSGD LSFNARWDLD TTGPALKAEL LVERAAGDLR LAVEDGSGTT
VIHTTGPRSS KPGEVRTHTV RGAGMRAHIK QARLSVRAQG DDVQAKLDWD SERAGTLTAQ
LGTRLAQQNG TWTWPEKAPL SGQIDARMPD IGIWALFAPP GWRVTGSLQA KAEISGDRQN
PQWQGNLSAD GLSILSALDG IDLQNGVLRA RLQGNRLDLT ELRMQGGRGS NARILGYSGN
LTTAPREGGE LTGSGFVRWD PPNADGSNSG LSMDLRAQAT RLQVLVRADR QVSISGGLQA
KLEQGQFTLR GDLTTDRATI ILPEESAPSL DSDVVVHSAA SRKAEQEAAR KQQQADRKAQ
ARAETIKLPD ILVKLDLGRD FALQGYGITT RLEGALEVQG PTVAGGPPRI TGEIRTVQGR
YRAWGQSLDV ETGLIRFNGP YANPSLDILA LRPNIAVRAG VQVQGTANAP RVRLYSDPEM
PDAEKLSWVV MGRDPATGGA ESALLQQAAL SLLSGGRNNS GKIASNLGLD EIGFKGPGGE
GSTGAALTLG KRLSSDLYVT YEQSLSGAMG TLYIFYDLSR RLTLRGQTGE TSALDLIYTV
RKD