Gene Daci_1648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1648 
Symbol 
ID5747205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1842328 
End bp1842999 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content64% 
IMG OID641296728 
Producthypothetical protein 
Protein accessionYP_001562676 
Protein GI160897094 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAC CAATACTTCC ATTCGCGGTC TGGGAGCCCG GGACAAACCA GGCCTCGCTG 
CCGGCAAACG ACAACGCGCT ACGCTCCGAG ATCCTCGCGG GCCGTGTCAT CAGCAAGACC
ACAGCCGCGC AGCCCGTTGG CGTCGATGGC GCGATCTACA TCATCCCGGC CGGCGCCACG
GGGGCGATGT GGTCAACCTT CGGCGCGGGC GATCTCGCGA TCTTCCGGGG TGGCACTTGG
TACGCATATG CGCCAGTCGC GGGCGTGGTG GTCCACATGT CGGGGAGCCT CCAGCAATGG
GACGGAGCTG CGTGGGAAGA GATCTCGGGC GGCGGTGGAG GCTCGGATCG AAGCACAGTC
ACGGCACTGT CGATTTCTTC CGGGACCGTC GTCGTTGACT GCTCGCTTGG GGACTATTTC
ACACTCGCGC TAAACGCAAA CGTGACCAGC TTGTCGTTCA GCGGGCTGCC CGGCAGCGGC
CACGGCGCAA GCCTGATGCT GCGCTTCACA CAGGACTCAA CGGCCCGCAC ACTCGCTTGG
CCATCATCGT TCCGATGGGA GGGTGCCGCC CCCGCAATAT CCACGGCAAG CGGCGCTGTA
GATTTGCTAG CGATCACCAC ATTCGACAAC GGAGTGACAT GGCAGGCGAC TCTGAGCAAG
GGGCGGTCAT GA
 
Protein sequence
MSTPILPFAV WEPGTNQASL PANDNALRSE ILAGRVISKT TAAQPVGVDG AIYIIPAGAT 
GAMWSTFGAG DLAIFRGGTW YAYAPVAGVV VHMSGSLQQW DGAAWEEISG GGGGSDRSTV
TALSISSGTV VVDCSLGDYF TLALNANVTS LSFSGLPGSG HGASLMLRFT QDSTARTLAW
PSSFRWEGAA PAISTASGAV DLLAITTFDN GVTWQATLSK GRS