Gene Daci_1619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1619 
Symbol 
ID5747176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1815479 
End bp1816192 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content56% 
IMG OID641296700 
Productputative phage repressor 
Protein accessionYP_001562648 
Protein GI160897066 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0134521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAG GGAGCCGTAA GGCGATAGTC ACCGACTTGC ACCGACAGGA GGCGCAAGCA 
CTAAGGGAAA TCTGGGACCG CCACAAGCCG AACCAGGCCG AATTCGGTCG AGAGTTTGGT
ATCGGCGGGC AGACGGCTGT GAGCAATTTT TTGCGAGGCA AGTCGGCTCT CAGCATGAAG
GCCGCAACCG GCTTCGCAAC CGGGCTGGGC TGCGATATCG GAGAGTTCAG TCCAAGACTT
GCAAGGGAGG CCAGCCACAT CGCGGAGGTG GTCGCAGCTT CGGACCCGTC GAACCCAAGC
GAGTTTGTCC CGGTCCGCCG TGTTGATGTG CGATTTTCGA ATGGCCACGG CAAAGTCATC
TACACAGAAG ATGATCACCC ACCCCTGGTT TTTAGACGCG ATTTCCTGAA CTCGGTTGGC
ATACGTAACG GTGATGCTGT AGTTGTAGAG GCCGAGGGGG TAAGCAACGA ACCAAAGATC
ATGGACGGAT CCGCCGTTCT TGTGAATAGA GGGGACAGGG AGCGGCTCGC AGGCGACTTC
TTTGCTTTCC GAGTGGATGG GGAACTCATG ATCAAGCGAC TTGAGCGGAT CGATGGTGTG
GGCATACTCG CCACTGCAGA GAACAGCAGT TTCCGGCCTA AGTCTCGCAT CTACACGAAG
GCTGAGGACT TTGAGATCAT TGGCCGTGCT GTTTGGGTGG GCTCTCTACT CTGA
 
Protein sequence
MEKGSRKAIV TDLHRQEAQA LREIWDRHKP NQAEFGREFG IGGQTAVSNF LRGKSALSMK 
AATGFATGLG CDIGEFSPRL AREASHIAEV VAASDPSNPS EFVPVRRVDV RFSNGHGKVI
YTEDDHPPLV FRRDFLNSVG IRNGDAVVVE AEGVSNEPKI MDGSAVLVNR GDRERLAGDF
FAFRVDGELM IKRLERIDGV GILATAENSS FRPKSRIYTK AEDFEIIGRA VWVGSLL