Gene Daci_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1616 
Symbol 
ID5747173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1813003 
End bp1814121 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content64% 
IMG OID641296697 
Producthypothetical protein 
Protein accessionYP_001562645 
Protein GI160897063 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000580173 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAGAT CGAGGACCGC GAGCTTGTGC GTCAAGCATA TGCCGCAGCC CGTCGTGAGC 
AACTCATCGC AGCTGGCGTG CCACCCGAGG TGCGCGAGCA AACCATCCAG GCCGAGATCG
ACGCGGGCGC CGCGTTCCAG GCCCTCCCCA TCACCATCAA AAGGAGCACC TCATGAGCCA
GGCCGCATGC CTGTTTCGTC TCGTCGCCAT GCGCCGCCGC GCTGGCGGCA CCCTGCCGCA
GTCCATGGCC TGGGCCTTGG GCCTGCTCTG GCGCAATCAC CGCGCATCGC AGCGCCAGCA
CCTGTAATCC CCATCGAGAT CAACATGCAA GACAACCAGG CGTTCCGCGC CCTCTTCACA
CTGCCGCCCG TACAAACCAG CGCCAGCACA GCGCTCTCGA TACCGGAGAC ACCCGCCCCA
AAGAACGAGA CCGGCGACCG CGAGTTGGAT GCTGTGCTCT GGCTGCGCGA CTGCATCAAG
ACCGCTCACC CGGTGTTGAT CGACAAGGCG CTGCTGGCCT TCAAGCAGAT CAAGACCCCC
GCCAAGGACC TTGAGGATCG ATACCGCCAG TACGTCGCCC GCGTCTCCAA TGGCCACTTC
GCGGCTGTGC TCATGACCTT CGGTTTCGCC GACATGGAGT CGCTCGCGAA GCGCACTCTG
GAGCGGCAGG CGCGGAAGGA TGAGGCAATG TCCCGATTCG GCACCGTGGA AGGCCTTTTC
GCCGACACGC CGTCTGAAGC CGCATGCAAG GCTGCGCTGA AGGGCCTGAG CAAAAAGAAG
GGCTCCACCT GGGAATACGA CACAGCCAAA GCCGATGCAC GTTTCCTGAA GCACCCAGCC
CTTGTCCCGG CAACGCTTGC GGATTGCCTA CACGCCCAGG CGTATGAGCG CACCCTCTAT
CGGCTGCGCA GTGCCAGCGT GGACATGGCT GGCGACCACT GGCCGGAGTT CCAGGAGCAC
GTCGATTTCT GCTTTCGCCA ACTCGCCCAA ATCAAGCCGC GCTCCAAGGC CGAGGCCCTG
GCGGTATTCG ATCACCTGGA GGAGCGCGAA GCTACCGACC GGAGGGAAGG TCCAGACATC
ATCCGCAACC TGATAAGCGG CGGGTGGCCC GCAGATTGA
 
Protein sequence
MVRSRTASLC VKHMPQPVVS NSSQLACHPR CASKPSRPRS TRAPRSRPSP SPSKGAPHEP 
GRMPVSSRRH APPRWRHPAA VHGLGLGPAL AQSPRIAAPA PVIPIEINMQ DNQAFRALFT
LPPVQTSAST ALSIPETPAP KNETGDRELD AVLWLRDCIK TAHPVLIDKA LLAFKQIKTP
AKDLEDRYRQ YVARVSNGHF AAVLMTFGFA DMESLAKRTL ERQARKDEAM SRFGTVEGLF
ADTPSEAACK AALKGLSKKK GSTWEYDTAK ADARFLKHPA LVPATLADCL HAQAYERTLY
RLRSASVDMA GDHWPEFQEH VDFCFRQLAQ IKPRSKAEAL AVFDHLEERE ATDRREGPDI
IRNLISGGWP AD