| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1599 |
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| Symbol | |
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| ID | 5747156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1796305 |
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| End bp | 1797336 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641296680 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_001562628 |
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| Protein GI | 160897046 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTCCC TTGTCCAGCG CCTGTCCCAG TCCGTGACCC AGGCGCATTC GTTGGAAGAG
TTGACGCGGC CCCTGCTGCA AATGCTCGAA GAGAGCACGC AGCTGGAGTC CACCTATCTC
ACCACCATCA ACGAAGAACA GGGCCAGCAG CGCGTGCTCT ACGCGCGCAA CGCCAGCGAG
ATGCAGATTC CCGAGGGCCT GGTCGTTCCC TGGGGCGACA CGCTGTGCAA GCGCGCCCTG
GACGAGGGCC GCATGTACAC GCCCGATGTG GGCGACTGCT GGGGAGACTC CGAGGCCGCG
CGTGAACTGG GCATACGCAC CTACGCCAGC GCGCCCGTGC GTTTTTCGGA TGGCCAGCTC
TACGGCACGC TGTGCGCGGC CAGCAAGTCC TCGCAGGCCC TGAGCAGCGA GGCCGAAGGC
ATGCTGCGCC TGTTCGCCAA CCTGATTGCC GAGCGCGTGG AGCGCGAGCA GCTCATCGCC
AGCCTGAACC GGACCAACCG GGAGCTGGCG GCGCTGGCCT TGCTGGACCC GCTGACCGGC
CTGCCCAACC GGCGCTGCCT CACCGATGAG CTGGGCCGGC TCATCGCCCG GTGTGCGCGC
AGCCAGGAAT GCGTGGTGGT GGGCTTCATC GACCTGGACC GCTTCAAGAA CGTCAACGAC
GAGCACGGCC ACGAGGTCGG CGACGCGCTG CTGCGTGCCA TGGGCGAACG CCTGTCCGCC
CACCTGCGCA GCGCCGACAT GCTGGCGCGC TTTGGCGGGG ACGAGTTCGT CTTCATCGGC
GTGGGGCCCT TGTTCGGCAG CGAGGCCGAT GCCGTGGCGC GTGAACTGCA GCAGCGCCTG
TCGGATGCCT CGGCCTTCCA GGTCGATCTG CCCGATGGCA AGACGCTGGA CTACGGCGGC
GCCAGCGTGG GCGTGGTCTG CCTGCGGCCG GACTCCATTG ACGCCGACGA CGCGCTGCAA
AAGGCCGATG CGGCCATGTA CCGCGTCAAG ATGGCGCGCA GCCGCGAAGC CAGGGGCAAC
GCGCTGCATT GA
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| Protein sequence | MESLVQRLSQ SVTQAHSLEE LTRPLLQMLE ESTQLESTYL TTINEEQGQQ RVLYARNASE
MQIPEGLVVP WGDTLCKRAL DEGRMYTPDV GDCWGDSEAA RELGIRTYAS APVRFSDGQL
YGTLCAASKS SQALSSEAEG MLRLFANLIA ERVEREQLIA SLNRTNRELA ALALLDPLTG
LPNRRCLTDE LGRLIARCAR SQECVVVGFI DLDRFKNVND EHGHEVGDAL LRAMGERLSA
HLRSADMLAR FGGDEFVFIG VGPLFGSEAD AVARELQQRL SDASAFQVDL PDGKTLDYGG
ASVGVVCLRP DSIDADDALQ KADAAMYRVK MARSREARGN ALH
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