| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1587 |
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| Symbol | |
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| ID | 5747144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1781189 |
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| End bp | 1782568 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641296668 |
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| Product | protein serine/threonine phosphatase |
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| Protein accession | YP_001562616 |
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| Protein GI | 160897034 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.661001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGCTC TGGACCCCTC CTCCACGCAG CACCCTGCAG CGGATCAGCT ACCTGACCCT
GCACCCGTTC CCGCGCTGGC CCCGGCGCCC GCCGCGCCGC GCCTTGTGGC CCGTGCAGGC
CAGCTCAGCC AGCCCACGGC ACCGATCCCC CCCGAGGCCA GCAACGAGGA TGTGCACCGG
CTGTTCAGCG AGCAGCCCCT GCTCGAAACC CTGGCCGTGG TGGCCGATGA CCGGCCGCTG
GGCCTGATCA ACCGCCAGCG CTTCATGGAG CAGTACGCGC GGCCCTTTGC GCGCGACGTG
TTCGGCCGCC GCAGCTGCCT GGTATTCACC GACACTGCGC CCATGGTGGT GGCGGCCGGC
CTGCCCATCG ACCAGCTGGT GCAGCAGGCG CTGGCCAGCG GCAGCCGCGT GCTCAAGGAC
GGCTTCATCA CCGTGGAGGA AGGCCGCTAC GCAGGCATAG GCACGGGCCA CGCGCTGATG
GCCGCCATGT CCGACATCGA GGCCGACAAG ACGCGCCAGC TCATGGCCAG CATCGACTAC
GCCAGCCTGA TCCAGCGCTC GCACCTGGTC GAATCCGACC GCGTGCTCGC CAGCCAGCTG
GCCGACCACG GCCTGCTGTG GGAGCCGCGC GACGTGGTGG GCGGCGATGC GTATTTCTTC
CGCGCCACAC CGCAGGGCCT GCTGGGCTGC ATGTTCGACT GCACGGGCCA CGGCGTGCCG
GGCGCCTTCA TGACGCTGAT TGCGCTGTCC TTTCTCGAAC AGGCCGTGGC GCCTGCAGGT
ATCGGCACCG GCACCGGCGC CGTCATCGAC CCCGGCGCCC TGCTGGGCCA GATGAACCGC
TACATCAAGC GCGTGCTGCA GCAGCGCAGC CGCGACGTCC AGCCCGCCTG GGGCGCACCG
GCAGCGCCCG CCGATGGCCT GCCCGCCGAA AAATCCTCCA GCGACGGCCT GGACGCCGCG
CTGTTCCTGC AGTCGCCCTG CGGCACGCAA CTGCGCTTTG CCTCGGCCCG GCTGGACCTG
CTGGTGGCGC CGCCCGGCGC GCAGGAGGCG GCCCAGGTGC AGATCCATGC CGGCGACAAG
CTGGGCATAG GCTATGCGAC CACGCCCGAC GACGCGGCCT GGAGCACGCA GGAGCTGGAG
GTCGCGCCCG GCTCGCTGCT GATGGTGGCC ACCGATGGCG TCATCGACCA ATTGGGCGGC
CCGCGCCAGA TCGCCCACGG CAGAAAGCGC CTGGCGCGCT TCCTGCACGA GCAGCACGAC
CGCCCCGCCG CCCAGGCATG CGCCGAATTC CGGCAGGCCT TTGCCCAGTG GCAGGGCACG
CAGCGCCGCC GCGACGATGT CTCGCTGCTG GTGTGGCGCA ACCAGGCCCT GCAGCCATGA
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| Protein sequence | MFALDPSSTQ HPAADQLPDP APVPALAPAP AAPRLVARAG QLSQPTAPIP PEASNEDVHR
LFSEQPLLET LAVVADDRPL GLINRQRFME QYARPFARDV FGRRSCLVFT DTAPMVVAAG
LPIDQLVQQA LASGSRVLKD GFITVEEGRY AGIGTGHALM AAMSDIEADK TRQLMASIDY
ASLIQRSHLV ESDRVLASQL ADHGLLWEPR DVVGGDAYFF RATPQGLLGC MFDCTGHGVP
GAFMTLIALS FLEQAVAPAG IGTGTGAVID PGALLGQMNR YIKRVLQQRS RDVQPAWGAP
AAPADGLPAE KSSSDGLDAA LFLQSPCGTQ LRFASARLDL LVAPPGAQEA AQVQIHAGDK
LGIGYATTPD DAAWSTQELE VAPGSLLMVA TDGVIDQLGG PRQIAHGRKR LARFLHEQHD
RPAAQACAEF RQAFAQWQGT QRRRDDVSLL VWRNQALQP
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