Gene Daci_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1583 
Symbol 
ID5747140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1778869 
End bp1779618 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content70% 
IMG OID641296664 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_001562612 
Protein GI160897030 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.867184 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGTC TGCGCAGGGG AGGGCGCGCC ACGCTGCGCG CAGCGCGCCT GTTCGGCCAT 
GTGTGCAAGG GCCTGTGGAT CGTGGCCCTG CGCTTTCCGC AGCTGCCCGA GGCGCGCCAG
CACGCCCATG TGCAGGCCTG GGCCCTGCAG TTGCTGGCCC ATGCGGGCGT GCGCCTGGAG
ATCCAGGGCG AGCCGCCGCG CCAGGGCCCC ATGCTCATGG TCAGCAACCA TATTTCCTGG
CTCGACATTC CCGTGCTGCA TGCGGCGCGG CACTGCCGCT TCATCTCCAA GTCCGACGTC
AAGGGCTGGC CGCTGATCGG CACGCTGGCC ACGGCGGCGG GCACGCTGTA CATCGAGCGC
ACCTCGCGCC GCGATGCCCG GCGCATGGTG CAGAGCATGG AGGAATCCCT GCAGCGCCGC
GAGATCCTGG CCATCTTCCC CGAAGGCACG ACGGGCGACG GCCGCAAGCT GCTGCCCTTT
CATGCCAACC TGCTGCAGGC GGCCGTGCAG ATCGATGCGC CCGTGCTGCC CGTGGGCCTG
CGCTTCATCG ACGGCGCCAC AGGGCAGATC AGCCATGCAC CCAGCTACGA GGGCGACGAA
ACCCTGCTGG GCTCCATCTG GCGCACGCTG TGCGCCGACG ACCTGGTGGC CGTCGTCCAC
TATGGGCAGC CGCAGACGGC CGAAGGCCGT GACCGCCGCG TCTGGGCCCA GGACCTGCAT
GCCGAGGTGG ACCGGCTGCG CCAGGCCTGA
 
Protein sequence
MSRLRRGGRA TLRAARLFGH VCKGLWIVAL RFPQLPEARQ HAHVQAWALQ LLAHAGVRLE 
IQGEPPRQGP MLMVSNHISW LDIPVLHAAR HCRFISKSDV KGWPLIGTLA TAAGTLYIER
TSRRDARRMV QSMEESLQRR EILAIFPEGT TGDGRKLLPF HANLLQAAVQ IDAPVLPVGL
RFIDGATGQI SHAPSYEGDE TLLGSIWRTL CADDLVAVVH YGQPQTAEGR DRRVWAQDLH
AEVDRLRQA