Gene Daci_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1580 
Symbol 
ID5747137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1775843 
End bp1776361 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content71% 
IMG OID641296661 
Productphosphoribosyltransferase 
Protein accessionYP_001562609 
Protein GI160897027 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.744978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.672092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAA CCATTGCGGG AGCCGGCAGC CTGGTGCTGG ACGCCGAGGC CCTGTACCGC 
GAACTGCTGC GCGGCGTGCG CAGCCTCATG GGGCCTGAAA CCCGCCTGGC CGGCATCACC
TCGGGCGGCG CCTGGCTGGT GGAGCGGCTG CACAAGGACC TGAACCTGCC CGGCAACCCC
AGCGTGCTGT CCTCGGCCCT GCACCGCGAC GACTTCGCGC AGCGCGGCAT GGCCACCAGC
GCCCAGACGC AGATCGACTT TGACGTCAAC GGCGCCGACA TCCTGGTGCT GGACGACGTG
CTCTACACCG GCCGCACCGT GCGCGCCGTG CTCAACGAAC TCTATGACTA CGGCCGCCCG
GCCTGCGTGC GCCTGGCGGT GCTGGTGGAC CGGGGCGGGC GCGAGTTGCC CTTCCAGGCC
GACTTTGCCG CCGCGCGCAT CGCGCTGCCG GCCGACCGCC TGCTGTCGCT GGCGCGCGAT
GACGCCGGCG TCTTCCAATT CCGCATCCAA GAGGCCTGA
 
Protein sequence
MSETIAGAGS LVLDAEALYR ELLRGVRSLM GPETRLAGIT SGGAWLVERL HKDLNLPGNP 
SVLSSALHRD DFAQRGMATS AQTQIDFDVN GADILVLDDV LYTGRTVRAV LNELYDYGRP
ACVRLAVLVD RGGRELPFQA DFAAARIALP ADRLLSLARD DAGVFQFRIQ EA