Gene Daci_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1578 
Symbol 
ID5747135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1774792 
End bp1775391 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content66% 
IMG OID641296659 
Producthypothetical protein 
Protein accessionYP_001562607 
Protein GI160897025 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.663829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTG AAACTGCGCC TATCAATCTG ACGCACCACT TCCTGATTGC CATGCCTGGC 
CTGGAAGACG AAGCGTTCTC GCGCAGTGTG ATCTACCTGT GCGAACACAG CGAGCGCGGT
GCGCTCGGTC TGATTATCAA CAAGCCCTCG CAGCTTACGC TGGAAGGCTT GCTGGAAAAG
GTGGATCTGG CCCTGGGCCG CGAGGACCTT CGCGGCAACC GTGTCTTCAA CGGCGGGCCC
GTGCAGACCG ATCGCGGCTT TGTGCTGCAC GATCCCATGG TCATCGAAGG CGCGCCCGAC
GACGAGTCCG CCTACGCCTC GACCATGACC ATCCCCGGCG GCCTGGAGAT GACCACCTCC
AAGGACGTGC TCGAAGCCCT GTCCGACGGC GCAGGCCCCA AGCGCCTGCT GGTCACCCTG
GGCTACGCGT CCTGGGGCGA GGGGCAGCTG GAGTCGGAGC TGGCCGAAAA CGCCTGGCTC
ACGGTGGGCG CCGACGCCAA CGTCATCTTC GACACCCCGG TCGACGACCG CTATGACCGC
GCCCTGGGCC TGCTGGGCCT GCAGCGCTGG ATGATCTCGC CCGAGGCGGG GCGCGCATGA
 
Protein sequence
MSAETAPINL THHFLIAMPG LEDEAFSRSV IYLCEHSERG ALGLIINKPS QLTLEGLLEK 
VDLALGREDL RGNRVFNGGP VQTDRGFVLH DPMVIEGAPD DESAYASTMT IPGGLEMTTS
KDVLEALSDG AGPKRLLVTL GYASWGEGQL ESELAENAWL TVGADANVIF DTPVDDRYDR
ALGLLGLQRW MISPEAGRA