Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1572 |
Symbol | |
ID | 5747129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 1763178 |
End bp | 1763576 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641296653 |
Product | response regulator receiver protein |
Protein accession | YP_001562601 |
Protein GI | 160897019 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.277281 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGACAT CGGGCGCACC CTTGCGCGTA CTCGTGGTGG ATGACAGCAA TACCATCCGC CGCAGCGCAG AAATCTTCCT CAAACAGGGC GGGCACGAAG TGCTCCTGGC CGACGACGGC TTCGACGCAC TGTCCAAAGT CAACGACTAT CAGCCCCAGC TGATCTTCTG CGACATCCTC ATGCCCAAGC TGGACGGCTA CCAGACCTGC GCCATCATCA AGCGCAACGC GCGCTTCTCC GATACGCCCG TGGTCATGCT CTCGTCCAAG GACGGCGTAT TCGACAAGGC GCGCGGGCGC ATGGTGGGCT GCCAGGACTA CCTCACGAAA CCCTTCACCA AAGACCAGCT GCTGCAGGCC GTGGAGCAGT TCGGCAAGCA AACCATAGGA GCACTTTGA
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Protein sequence | MTTSGAPLRV LVVDDSNTIR RSAEIFLKQG GHEVLLADDG FDALSKVNDY QPQLIFCDIL MPKLDGYQTC AIIKRNARFS DTPVVMLSSK DGVFDKARGR MVGCQDYLTK PFTKDQLLQA VEQFGKQTIG AL
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