Gene Daci_1572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1572 
Symbol 
ID5747129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1763178 
End bp1763576 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content61% 
IMG OID641296653 
Productresponse regulator receiver protein 
Protein accessionYP_001562601 
Protein GI160897019 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.277281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACAT CGGGCGCACC CTTGCGCGTA CTCGTGGTGG ATGACAGCAA TACCATCCGC 
CGCAGCGCAG AAATCTTCCT CAAACAGGGC GGGCACGAAG TGCTCCTGGC CGACGACGGC
TTCGACGCAC TGTCCAAAGT CAACGACTAT CAGCCCCAGC TGATCTTCTG CGACATCCTC
ATGCCCAAGC TGGACGGCTA CCAGACCTGC GCCATCATCA AGCGCAACGC GCGCTTCTCC
GATACGCCCG TGGTCATGCT CTCGTCCAAG GACGGCGTAT TCGACAAGGC GCGCGGGCGC
ATGGTGGGCT GCCAGGACTA CCTCACGAAA CCCTTCACCA AAGACCAGCT GCTGCAGGCC
GTGGAGCAGT TCGGCAAGCA AACCATAGGA GCACTTTGA
 
Protein sequence
MTTSGAPLRV LVVDDSNTIR RSAEIFLKQG GHEVLLADDG FDALSKVNDY QPQLIFCDIL 
MPKLDGYQTC AIIKRNARFS DTPVVMLSSK DGVFDKARGR MVGCQDYLTK PFTKDQLLQA
VEQFGKQTIG AL