| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1563 |
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| Symbol | |
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| ID | 5747120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1754131 |
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| End bp | 1755201 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641296644 |
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| Product | NifR3 family TIM-barrel protein |
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| Protein accession | YP_001562592 |
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| Protein GI | 160897010 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.526458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCCC CACCCCTGTC CATAGGCCCC CATGCCCTGG CCAATCGCCT GTTCGTCGCC
CCCATGGCCG GGGTGACGGA TCGGCCGTTC CGCCAGCTGT GCAAGGCCCT GGGCGCGGGC
TACGCGGTCA GCGAGATGGT GACATCGCGC AAGGACCTGT GGAACAGCCT CAAGACCTCG
CGCCGCGCCA ACCATGAAGG CGAGCCCGGC CCCATCGCGG TGCAGATCGC GGGTACGGAC
GCCGAGATGA TGGCCGAGGC CGCGCGCTAC AACCTGGACC GCGGCGCCCA GATCATCGAC
ATCAACATGG GCTGCCCGGC CAAGAAGGTC TGCAACAAGT GGGCCGGCTC GGCCCTGATG
CAGAACGAGG CCCTGGCCGT GGAGATTGCC CAGGCTGTTG TAGAGGCCTG CGCCCCGCAC
GGCGTGCCCG TCACGCTGAA GATGCGCACC GGCTGGTGCG ACGCGCACAG GAACGCCGTG
GTGCTGGCCC GCCGCTTCGA GGAGGTGGGC ATACAGATGC TCACCGTGCA CGGCCGCACG
CGCGAGCAGG GTTACAAGGG CTTTGCCGAG TACGACACCA TCGCTGCCGT CAAGGCGGCG
GTGCGCGTGC CCGTGGTGGC CAATGGCGAC ATCACCAGCC CCGAGAAGGC GCGCGACGTG
CTCGCCTACA CGGGCGCCGA CGCCGTGATG ATCGGCCGCG CGGCCCAGGG CCGGCCGTGG
ATCTTCCGCG AGATCGCGCA CTTCATGGCC ACGGGCGAGC ACATGGCCCC GCCGCTGGTG
GCCGAGCTGC GCCGGCTGCT GCTGGACCAC CTGCAGGACC ACTACAGCCT GTACGGCGAG
GGCACCGGCG TGCGCAGCGC GCGCAAGCAC ATCGCCTGGT ACCTGCGCAG CCTGCCGGGC
GGTGAAGCAT TCAGACAACA CATCAACACC ATCGAGGACT GCGCGGTGCA ATGGCAGGCA
GTGGCCGACT ATCTGGACGC CCTGGGCGCA CGGATGGACC GGATACCGGC CGCCATCGAT
GCCGGCGCCA CAAGCGCCGA ATTCGGAGAG CCCGCAGGAA TGACAGTATG A
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| Protein sequence | MSSPPLSIGP HALANRLFVA PMAGVTDRPF RQLCKALGAG YAVSEMVTSR KDLWNSLKTS
RRANHEGEPG PIAVQIAGTD AEMMAEAARY NLDRGAQIID INMGCPAKKV CNKWAGSALM
QNEALAVEIA QAVVEACAPH GVPVTLKMRT GWCDAHRNAV VLARRFEEVG IQMLTVHGRT
REQGYKGFAE YDTIAAVKAA VRVPVVANGD ITSPEKARDV LAYTGADAVM IGRAAQGRPW
IFREIAHFMA TGEHMAPPLV AELRRLLLDH LQDHYSLYGE GTGVRSARKH IAWYLRSLPG
GEAFRQHINT IEDCAVQWQA VADYLDALGA RMDRIPAAID AGATSAEFGE PAGMTV
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