Gene Daci_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1561 
Symbol 
ID5747118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1752743 
End bp1753279 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content71% 
IMG OID641296642 
Producthypothetical protein 
Protein accessionYP_001562590 
Protein GI160897008 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTCT GGATGCATCA ACTGCTGAGC TGGCTGGCGC TGCCGCAGTT CGGCCTCAGC 
ACCGTGTTCA TCGTGGCCCT GATTTCGGCC ACGCTGCTGC CGCTGGGCTC CGAGCCTGCG
GTGGTCGGCC TGCTGCAGCT CAACCCCGAT CTGTTCTGGC AAACGGTCTT CGTGGCCACG
GCCGGCAATA CGCTGGGCGG CGCCATCAGC TGGTGGATGG GCCTGGGTGC GCACAAGGCC
TGGCGCGCGG CCCGCGAGCG GCGGCGCGCC GGACTGCCGG AGGATCTGCG GGCCAAGCCG
CCCCGCGCCC TGTCCCGCCA CGAGCGCCGC GCCCGCGTAT GGCTGCGCCG CCTGGGTGCC
AAGGCCTGCC TGCTGAGCTG GCTGCCCGTG GTGGGCGATC CGCTGTGCGC CGTGGCCGGC
TGGCTGCGGT TGCCGTTCTG GCCCTGCGTG TTCTACATGG CCATCGGCAA GTTCCTGCGC
TATGTGGTGA TGACGGTGGT GCTGCTGCAG CTGCTGCCGG CCTCCTGGGC CAGCTGA
 
Protein sequence
MEVWMHQLLS WLALPQFGLS TVFIVALISA TLLPLGSEPA VVGLLQLNPD LFWQTVFVAT 
AGNTLGGAIS WWMGLGAHKA WRAARERRRA GLPEDLRAKP PRALSRHERR ARVWLRRLGA
KACLLSWLPV VGDPLCAVAG WLRLPFWPCV FYMAIGKFLR YVVMTVVLLQ LLPASWAS