| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1556 |
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| Symbol | |
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| ID | 5747113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1747869 |
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| End bp | 1749767 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641296637 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_001562585 |
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| Protein GI | 160897003 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATT CCACGCCCGA AGTCATCTTC CACAACGGCC GCTTCACCAC GCTGAACAAG
GCCCAGCCCA CCGCCACCGC CGTGGCCGTG AAGGACGGCC GGTTCATCGC CGTTGGCTCG
GACGCCGAGG TGCTGGCCCT GGCCGGCAGC GGCACGCGCC GCATCGATCT GCAGCGCCGC
AGCGTGCTGC CCGGCCTGTT CGACAACCAC ACGCACGTGA TCCGTGGCGG CCTGAACTTC
AACCTGGAGC TGCGCTGGGA CGGCGTGCGC TCGCTGGCCG ACGCGCTGGA CATGCTCAAG
CGCCAGGTGG CCATCACGCC TGCGCCGCAG TGGGTGCGCG TGGTCGGGGG GTTCACCGAG
CACCAGTTCG TGGAAAAGCG CCTGCCCACC ATCGACGAGA TCAATGCCAT CGCGCCCGAT
ACGCCGGTCT TCCTGCTGCA CCTGTATGAC CGCGCCCTGC TCAACGCCGC CGCCCTGCGC
GCCGTGGGCT ACACCCGCGA CACGCCCCAG CCTGCAGGCG GCGAGATCAC GCGCGATGCC
AACGGCAACC CCACGGGCCT GCTGCTGGCC AAGCCCAACG CCACCATCCT CTACAGCACG
CTGGCCAAGG GCCCCAAGCT GCCGCTGGAC TATCAGGTCA ATTCCACGCG CCACTTCATG
CGCGAACTCA ACCGCCTGGG CGTGACCGGC GTGATCGATG CGGGCGGGGG CTTTCAGAAC
TACCCCGACG ACTACGACGT GATCCAGAAG CTCAGCGACG CCAACCAGAT CACCGTGCGC
CTGGCCTACA ACCTGTTCAC GCAAAAGCCC AAGGAGGAGA AGGCCGACTT CCTCAACTGG
ACGCAAAGCG TGAAGTACAA GCAGGGCAAC GACTATTTCC GCCACAACGG CGCGGGCGAG
ATGCTGGTGT ACTCGGCCGC CGACTTCGAG GACTTTCGCC AGCCGCGCCC CGACATGCCC
CCCAGCATGG AGGGCGACCT GGAGGAAGTG GTGCGCGTGC TGGTGCAGAA CCAATGGCCA
TGGCGCCTGC ACGCCACCTA TGACGAGACC ATCTCGCGCG CGCTCGATGT GTTCGAGAAG
GTGCACCGCG ACACGCCCAT CGACGGCCTG AACTGGTTCT TCGACCATGC CGAGACCATT
TCGGACAAGT CCATCGACCG CATTGCGGCG CTGGGCGGCG GCGTGGCCGT GCAGCACCGC
ATGGCCTACC AGGGCGAATA TTTCACAGAA CGCTACGGCG CACGCGCCAC CGAGGCCACG
CCGCCCGTCA AGAAGATCCT GGAGCGCGGC GTGAAGACCT CGGCCGGCAC GGACGCCACG
CGCGTGGCCT CCTACAACCC CTGGGTGTCT CTGTCGTGGA TGGTGACGGG CAAGACCGTG
GGCGGCCTGC AGATGTACCC CCAGCGCAAC CTGCTGGACC GCGAGACCGC GCTGCGCATG
TGGACCGAGA ACGTGGCCTG GTTCTCCAAC GAGGAAGGCC TGCGCGGCCG CATCCAGGTG
GGCCAGCTGG CCGACATGAT CGTGCCCAGC AAGGACTACT TCGCCGTGCC CGAGGACGAG
ATCTCCTTTC TCACCTCCGA GCTCACCGTG GTGGGCGGCC GCGTGGTCTA TGGCGCAGGC
CCCTTCCAGC AGCATGACGA CAACCCGCTG CCGCCGGCCA TGCCTGACTG GTCGCCCGTG
CGGCGCTTTG GCGGCTACGG CGCCTGGGGC GAGCCCGAGG GCGCGGGCAG GAACTCGCTC
AACCCCGCGC GCTACCGCAG CCTGGCGGCG GCCTGCGGCT GCGGCACCAG TTGCGGCATG
CACGGCCACA GCCATGCCGA CGCATGGGCA TCGAACGTGC CGACCTCGGA CCCCCGAAGC
TTCTTCGGCG CGCTGGGCTG CTCCTGCTGG ATGGCCTGA
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| Protein sequence | MSDSTPEVIF HNGRFTTLNK AQPTATAVAV KDGRFIAVGS DAEVLALAGS GTRRIDLQRR
SVLPGLFDNH THVIRGGLNF NLELRWDGVR SLADALDMLK RQVAITPAPQ WVRVVGGFTE
HQFVEKRLPT IDEINAIAPD TPVFLLHLYD RALLNAAALR AVGYTRDTPQ PAGGEITRDA
NGNPTGLLLA KPNATILYST LAKGPKLPLD YQVNSTRHFM RELNRLGVTG VIDAGGGFQN
YPDDYDVIQK LSDANQITVR LAYNLFTQKP KEEKADFLNW TQSVKYKQGN DYFRHNGAGE
MLVYSAADFE DFRQPRPDMP PSMEGDLEEV VRVLVQNQWP WRLHATYDET ISRALDVFEK
VHRDTPIDGL NWFFDHAETI SDKSIDRIAA LGGGVAVQHR MAYQGEYFTE RYGARATEAT
PPVKKILERG VKTSAGTDAT RVASYNPWVS LSWMVTGKTV GGLQMYPQRN LLDRETALRM
WTENVAWFSN EEGLRGRIQV GQLADMIVPS KDYFAVPEDE ISFLTSELTV VGGRVVYGAG
PFQQHDDNPL PPAMPDWSPV RRFGGYGAWG EPEGAGRNSL NPARYRSLAA ACGCGTSCGM
HGHSHADAWA SNVPTSDPRS FFGALGCSCW MA
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