Gene Daci_1552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1552 
Symbol 
ID5747109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1743910 
End bp1745058 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content69% 
IMG OID641296633 
Producthistidine kinase 
Protein accessionYP_001562581 
Protein GI160896999 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATGAGA ATTGGCAGCT GACAGTCCAT TCCTTTTCCC TGCACGCCAT GACCACCGCT 
CTGCGCCGCT TTCCCCATTG GCCCCGCGCC CTGATCCTGG CGGCCATGGC GGCCGCCATG
GCCGCGATCT TCGCGCTGGA CACGCTGACC GACTACGCCG TGGCGGCCGC CGTGTTCCAT
ACCGCCATCA TCCTGGTGGC GGTGCGCTGG TTCAGCCCGC GCGTGGTCAT CGGCCTCACG
GCGCTGTGCA TCGTGCTGAC CCTGGCCAGC TTCGCGCTCA CGCCTGCCGG TGCCTATCGC
ACCGGACTGA TCAACATGGT GATCAGCATC CTGGCCATTG CCATCACGGC CTATCTGGGC
CTGAAGATGG TGGCGGCCCA GAACGCGGCC CATGAGGCGC GCACCCAGCT GATGCGCATC
ACCCAGACCA CCAGCCTGGG GCAGTTGACG GCCTCCATCG CCCATGAGGT CAACCAGCCG
CTGGCGGCCA TCGTCACCAG CGGCAATGCC TGCCAGCGCT GGCTGGCCCA GGACCCGCCC
AATCTGGCCA AGGCCGGCCA GGCGCTGGAG CGCATCCTGG GCGATGCGCA GCGCGCCAGC
GATGTCATTG CCCGCATCCG CAGCATGGCG CGCGGCGAGG CGCCCAGCCG CCAGTCCTTC
GACCTCAACG ACGCCGTGCG CGAGATGGCG CGCCTGTCGG ATGCCGAGCT GGACCGGCGC
GGCGTGGCCC TGGACCTGCA ACTGGCGCCC GCGCTGCAGC CGGCCTGGGC CGACCGCGTG
CATATCCAGC AGGTGCTGGC CAACCTGCTG CTCAACGCCA TGGATGCCAT GCAGGGCACG
CCCGCCGCGC AGCGGCGCAT CACCGTCACC ACCCAGGCCC TGGGCCAGCA ACTGGTGCTG
ACCGTGGCCG ATGCGGGCGA AGGCCTGTCG CCCCTGGCCC GCACCCACCT GTTCGATGCC
TTCTGGACCA CCAAGCCCGA CGGCATGGGC CTGGGCCTGA ACATCTGCCG CCACATGGCC
GAGGCCAACG GCGGCCGCAT CTGGGCCACG GACCGCGAGG ACATGCGCGG CGGCACGGTC
TTTCACATCA CCATTGCCTG CGCCCCGGCC ACGGGCGACA GGTCTTCCAC GGGATTGCGC
CATGGTTGA
 
Protein sequence
MNENWQLTVH SFSLHAMTTA LRRFPHWPRA LILAAMAAAM AAIFALDTLT DYAVAAAVFH 
TAIILVAVRW FSPRVVIGLT ALCIVLTLAS FALTPAGAYR TGLINMVISI LAIAITAYLG
LKMVAAQNAA HEARTQLMRI TQTTSLGQLT ASIAHEVNQP LAAIVTSGNA CQRWLAQDPP
NLAKAGQALE RILGDAQRAS DVIARIRSMA RGEAPSRQSF DLNDAVREMA RLSDAELDRR
GVALDLQLAP ALQPAWADRV HIQQVLANLL LNAMDAMQGT PAAQRRITVT TQALGQQLVL
TVADAGEGLS PLARTHLFDA FWTTKPDGMG LGLNICRHMA EANGGRIWAT DREDMRGGTV
FHITIACAPA TGDRSSTGLR HG