| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1549 |
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| Symbol | |
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| ID | 5747106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1738015 |
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| End bp | 1739223 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641296630 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001562578 |
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| Protein GI | 160896996 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCT TTCTCGCTTC TGAACGATCA GGCCGACCCC ATGGTCAACC CCATGGCCTG
CACCAGCGCC ATCCCTTGCT GGCGGCCGCC TGGCCTGTGG GCGGGCTGCT GATCAGCGTG
GCCATGGCCG CCTGCAACGG GCCGGCCGAG CCCACGGCAG CCACCCATGC AGCCACCGCC
GCCCCGCAGC CGGCCCCCGT GCGCCGCGAA GGCAACCTCA TCGTGGTGCC CGAAGGCTCG
CCGCTGCGCG AGCGCCTGCA GGTGGCCGAG ATCGCGCTGC AGCCGCTGCA GACCCGCCTG
TCGGCCCCCG CCACCATCGA GGCCGAGCCT GAAAAGCTGG TCCGCATCAC GCCGCCCGTG
GCGGGCCGCC TGGTGCGCCT GCACCACCAG CTGGGCGATG CGGTGAAGGC CGGCGATGCG
CTGATCACCA TGGACTCCTC CGAGATCTCC AGCGTGCGTG CCGAGCACGC CAAGTCCCAG
GCCGCGCTGC TGCACGCGCG CCAGGAATTC GACCGCCAGA AGCTGCTGTT CGATGCCGAG
ATCGCCGCGC GCAAGGACTA CGAGGCCGCG CAGCAGTCGC TGGCCGCAGC AGGTGCCGAT
GCGCGCGCCG CCTCCGACCA CCTGTCCCAG CTGGGTGCGG CCGTGCAGGA AGGCTCGCGC
GGCAGCTACG TGGTCAAGTC GCCCATCAGC GGGCGCGTGG TCGAGATGGC GGGGTCGCAG
GGGGGCTACT GGAACGATGT GAATGCCTCC GTCATGACCG TGGCCGACCT GCGCAAGGTC
TGGCTCAGCG CCAGCGTCAG CGAGCGCGAC CTGGCCCATG TGGACGTGGG CCAGCAGGCC
CACATCGCGC TGGCCGCCTA TCCCGACCTG CAGCTGCAGG GCCGCGTGCA GTACGTGGGC
GAGCTGGTGG ACACCGCCAC GCGCAGCGTC AAGGTGCGCG TGGCCGTGGA CAACCCCGAA
GGGCGGCTGC GCCCCGGCAT GTTTGCGCGC GTGGGATTCG ACGCCCCGGC GCGCCAGGCC
GTGATGGTGC CGGCCGCAGC CCTGCTGCAG GGCCAGGTCA GCACGCGCGT CTTCGTGGAC
AAGGGCGGCT GGCGCTTCGA GCCGCGCGAC GTGCAGGTCG GCGCGCAGCA GGACGGCCAG
GCCGAGATCC TCTCGGGCCT GGCGGCCGGC GAGCGCGTGG TGGTCAACGG GGGAGTGCTG
CTGCAATGA
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| Protein sequence | MTRFLASERS GRPHGQPHGL HQRHPLLAAA WPVGGLLISV AMAACNGPAE PTAATHAATA
APQPAPVRRE GNLIVVPEGS PLRERLQVAE IALQPLQTRL SAPATIEAEP EKLVRITPPV
AGRLVRLHHQ LGDAVKAGDA LITMDSSEIS SVRAEHAKSQ AALLHARQEF DRQKLLFDAE
IAARKDYEAA QQSLAAAGAD ARAASDHLSQ LGAAVQEGSR GSYVVKSPIS GRVVEMAGSQ
GGYWNDVNAS VMTVADLRKV WLSASVSERD LAHVDVGQQA HIALAAYPDL QLQGRVQYVG
ELVDTATRSV KVRVAVDNPE GRLRPGMFAR VGFDAPARQA VMVPAAALLQ GQVSTRVFVD
KGGWRFEPRD VQVGAQQDGQ AEILSGLAAG ERVVVNGGVL LQ
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