Gene Daci_1547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1547 
Symbol 
ID5747104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1735524 
End bp1736498 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content71% 
IMG OID641296628 
Producthypothetical protein 
Protein accessionYP_001562576 
Protein GI160896994 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCA GACAAGCACT CAAGGCCGCA CTGGCCATAG GCGCCCCGCC CCTGCTGGGC 
ATGGGCACGG CACACGCCCA GACCGGCAAG CCCGTCGAAT GGGTGGTGGG CTTTGCCGCA
GGCGGCGGCT CGGACGCCGT GGCGCGCACC GTGGGCGAGT CCTTTGGCAA GGCCCTGGGC
CGCACCGTGG TCGTCATGAA CAAGCCCGGG GCCGGCACCA ACATCGCCGC CGAATACGCG
GCGCGCACGC GCGAGCTGGG CAGCCTGGTC TTCACGGCCG ACTTCGCCAC GCTGGCGGCC
AACCCTCACC TGTTTCGCAA GCTGGCCTAC AACGCCGAGA AGGACTTCGT GCCCATCGGC
CTGCTGGCGC GCTTTCCGCT GTTCCTCGTG GTCGGCAACC AGCTGCCGGT GCACAACCTG
CAGGAGTTCA CGCAGTGGGT GAAGGCCCAG CCAGGCCCCG TCAGCTACGG CAGCCCGGGG
TTGGGCACGC CCCACCACCT GGCCACCGAA CTGCTGTCGC AGCGCCTGGG CCTGAAGATG
TCCCATGTGC CCTATCGCGG CGCGGGGCCG GCCCTGATCG ACGTGATCGG CGGCCAGATC
CCCTTCATGC TGGCCGACAG CGCGGCGGCG GCCCAGCACA TTGCGGCCGG CAAGCTGCGC
GTCGTCGGCG TGGCCAGCGC CGAGCGGCTC AAGAGCCATC CGGCCGTGCC CACGCTGGCC
GAGCAGGGCG TCAAGGACTT CGAGGCCCAT GCCTGGCAGG GCCTGGTCGC ACCCGCAGGC
ACGGACGACG CCACCGTACA GGCCTGGTCC GTGGCGCTGC AGCAGGCGCT GCGCTCGCCT
GCCGTGCTGG CGCGCTTCGA GGCGCTGTCG CTGGAGCCGC TGCCCGGCAC GCCTGCGCAG
ATGCGTGACT ACTGGCGCAG CGAAAGCCGG CGCTGGGGCC AGGTCATCGA GTCGGCGGGC
ATACGGCTGG ATTGA
 
Protein sequence
MLRRQALKAA LAIGAPPLLG MGTAHAQTGK PVEWVVGFAA GGGSDAVART VGESFGKALG 
RTVVVMNKPG AGTNIAAEYA ARTRELGSLV FTADFATLAA NPHLFRKLAY NAEKDFVPIG
LLARFPLFLV VGNQLPVHNL QEFTQWVKAQ PGPVSYGSPG LGTPHHLATE LLSQRLGLKM
SHVPYRGAGP ALIDVIGGQI PFMLADSAAA AQHIAAGKLR VVGVASAERL KSHPAVPTLA
EQGVKDFEAH AWQGLVAPAG TDDATVQAWS VALQQALRSP AVLARFEALS LEPLPGTPAQ
MRDYWRSESR RWGQVIESAG IRLD