Gene Daci_1544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1544 
Symbol 
ID5747101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1731808 
End bp1732737 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content71% 
IMG OID641296625 
ProductLysR family transcriptional regulator 
Protein accessionYP_001562573 
Protein GI160896991 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCA AGAACCTGGA CCTCAACCTG CTGCGCGTCT TTGACGCCGT GTACCGCCAC 
TGCAGCGTCA GCCGCGCGGC CGAGGAGCTG GGCATGTCCC AGCCCGCCGC CAGCCAGGCC
GTGACGCGGC TGCGCCTGCT GCTGGGCAAC CCGCTGTTCG AGCGCGCGCA TGCGGGCGTG
CGCCCCACTC CGCGTGCCGA GCGCCTGGCG CTGGCCGTGC GCCAGGCGCT GGAGGTGCTG
GAAGTCGCCA TGTCCGAGGC CCAGAGCTTC GAGCCACTGC AGGCGCGCCA GCGCTTTCGC
ATCCACCTGA GCGACATCGG CGAGGCGCGC TTTCTGCCGC CTCTCATGCA GGCGCTGCAC
CAGCGCGCCC CGCATGTGCA GCTGGAGACC CTGCCCATGC CGCTGGACGG CATTGCCGAT
GCGCTGGACC GGGGCACGCT GGACATCGCC ATCGGCTTTC TGCCGGGTGG CACGCGGACC
CGGCAGACCG TGCTGCTGTC CGACCACTAC GGCGTGCTGC TGCGCAGCGG CCACCCCGCG
CTGGCGCACC TGCCCGAAGG CGCGCCACTG GCGCTGGCCA CGCTGCGCCA GCTGGATTTC
GCGGCGGTGC GCTCGCATTC GGAGACGCTG CGCATCCTGC AGGCGCTGCG GCTTGATGAG
CGCATCCGCC TGTCGGCCGC GCATTTCATG GCCGTGCCCT CCATCGTGGG CAAGACCGAC
CTGGCGGTGA TCATGCCGGC CGAGATCGCG GCCGGCTTTG TCGAGCGCGG CGGCTATGCG
GTGCGCGATG CCGACCTGCC CGATCACCAC TTTGACGTGT CGCTGCACTG GAGCTGGCGC
TTCGAGCAGG AACCGGCCAA GCGCTGGCTG CGCGAGCTGG TCTGCGAGCT GTTCCAGCAG
CCCCGGCACC GCGAGGCCGC CGCGCCCTGA
 
Protein sequence
MDIKNLDLNL LRVFDAVYRH CSVSRAAEEL GMSQPAASQA VTRLRLLLGN PLFERAHAGV 
RPTPRAERLA LAVRQALEVL EVAMSEAQSF EPLQARQRFR IHLSDIGEAR FLPPLMQALH
QRAPHVQLET LPMPLDGIAD ALDRGTLDIA IGFLPGGTRT RQTVLLSDHY GVLLRSGHPA
LAHLPEGAPL ALATLRQLDF AAVRSHSETL RILQALRLDE RIRLSAAHFM AVPSIVGKTD
LAVIMPAEIA AGFVERGGYA VRDADLPDHH FDVSLHWSWR FEQEPAKRWL RELVCELFQQ
PRHREAAAP