Gene Daci_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1542 
Symbol 
ID5747099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1729566 
End bp1730561 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content72% 
IMG OID641296623 
Producthypothetical protein 
Protein accessionYP_001562571 
Protein GI160896989 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTTT CTTTGCGCGG GCGGAGACTC TGGACGCTGG CGGCCTGCGC GCTGCTGGCT 
GGCGCATCGG GGCTGTGGCT GGCGGCGCCG GGCAAGGCCG GCACGCGCCT GGAGCGGCCC
ATCACCATCG TCGTGACGTT TCCGCCGGGC GGCGGCACGG ACCTGCTGGC GCGGCGCCTG
GGCGAGCAGC TGCAGCAGCG CCTGGGCCAG CCCGTGGTGG TGGAGAACCG GCCCGGCGCC
AGCGGCAACA TTGGCGCCCA TGCCGTGGCC CAGGCCGCAG CGGACGGCAG CACCTTGCTG
ATGGCCAACA GCTCGTTCGC CATCAACCCC GGTGTCTACG AACGCCTGGA TTTCGACCCG
CGCAAGGACT TCACGGCAGT GTTCAACGCA GGCTCCATTG CCTCGGTGCT GGTCGTGCCT
GCGGACAGCG CGCTGCAGAC GCTGGAGGAT GCGCTGGCCC AGGCGCGCCA GGAACGGCCG
CTGCTGTTCG CCTCCTGCGG CAACGGCACG CCCCAGCACC TGGCCGGCGA GATGCTGGCC
CGCGACGCGA AGCGCTTTGT GCAGCATGTG CCCTACAAGG GCTGCGGCCC GGCCATCACG
GCCGTGGCGG CAGGCCAGGT GGCGGCGGGC ATGGTCACGG CCAGCAGTGC TGCGGCCATG
ATCGCTGCAG GCCGCGTGCG CGCCCTGGCC GTCACGGCGC CGCAGCGACT GCCGCAGCTG
GCCGGCGTTC CCACGGTGGC CGAGCGCGGC CTGCCGGGCT TTGCGGTGGA GCAGTGGCAC
GGCCTGCTGG CACCTGCCGC CACGCCACGG GCCACGGTGC AGGCATTGCA TGACACGCTG
GAGCAGGCGC TGGCCGATCC CGCCGTCAGC GCTGGCTTGC GCGACCAGGG CTACACCCTG
GCGCGGCAGA CACCGGGCCA ATTCCAGGCG CTGATCGCGG CCGACATCGA CCGCTATGCC
GCCGTGACGC GTGCGCTGGG CCTGAAGGCC GATTGA
 
Protein sequence
MAFSLRGRRL WTLAACALLA GASGLWLAAP GKAGTRLERP ITIVVTFPPG GGTDLLARRL 
GEQLQQRLGQ PVVVENRPGA SGNIGAHAVA QAAADGSTLL MANSSFAINP GVYERLDFDP
RKDFTAVFNA GSIASVLVVP ADSALQTLED ALAQARQERP LLFASCGNGT PQHLAGEMLA
RDAKRFVQHV PYKGCGPAIT AVAAGQVAAG MVTASSAAAM IAAGRVRALA VTAPQRLPQL
AGVPTVAERG LPGFAVEQWH GLLAPAATPR ATVQALHDTL EQALADPAVS AGLRDQGYTL
ARQTPGQFQA LIAADIDRYA AVTRALGLKA D