Gene Daci_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1533 
Symbol 
ID5747090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1721621 
End bp1722487 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content70% 
IMG OID641296614 
ProductMOSC domain-containing protein 
Protein accessionYP_001562562 
Protein GI160896980 
COG category[R] General function prediction only 
COG ID[COG3217] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.134662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACC AAGAACGAGA CGTGCAGGGC CGCATTGCCC AGTTGTGGGT CTATCCCGTC 
AAATCCTGCG CGGGCATTAC GCTGCAAAAG ACGCAGGTCG GCGCTACCGG CCTGGCCTGG
GACCGCCACT GGATGGTGGT CGATGCGCAG GGCGAATTCC TGACCCAGCG CGACCATCCG
CGCATGGCCT GGATACGCCC CGAGCTGGAG GCCGGGCACC TGGTGCTGCA CTTTCCCCAG
CAGCCGCCGC TGCGCATCGC GCTGCAGGCC ACGGGGCCGG AGCGCCGGGC GCGCGTCTGG
TCGGACTGGG TGCAGGCCTG GGACATGGGC CCCGAAGCCG CCCGCTGGCT GACGCAGGCC
CTGGGCACGG ACTGCTCCCT GGTGCGCTTC GACCCGGCGG CGCCGCGCCG CACCAGCGCG
CGCTGGACCG GGGGCGAGGC CGCACCTGTG CACTTCGCGG ACGGCTATCC GCTGCTGGTA
CTGAGCCAGG CGGCCGTGGA TGAACTCAAC CAGCGCCTGC AGGCGGCCGG CCACGCCGCG
GTGGACGCAC GGCGCTTTCG CCCCAACATC GTGATCGAAG GCCTGGAGGC CCATGACGAG
GACCGGGTCG ACGGGCTCGA CGTGCTCGAT GCCCAGGGCC TGCGGCTGCG CATGGCCAAG
CCCTGCACAC GCTGCCCCAT TCCCGACATC GACCCCGTCA CGGCCGTGCA GGGCACCGCC
GTGGGTGATG CCATCCGTAC CTACCGCCAG GACGACCGTG TCGATGGCGC CATCACCTTC
GGCATGAATG CCGTGCTGGA AGGTCTGCAC GACGGAGCCG AACTGGTCGT TGGCCAGTCC
GTGGCCGGCG ACTGGCAGTT CGCCTGA
 
Protein sequence
MSDQERDVQG RIAQLWVYPV KSCAGITLQK TQVGATGLAW DRHWMVVDAQ GEFLTQRDHP 
RMAWIRPELE AGHLVLHFPQ QPPLRIALQA TGPERRARVW SDWVQAWDMG PEAARWLTQA
LGTDCSLVRF DPAAPRRTSA RWTGGEAAPV HFADGYPLLV LSQAAVDELN QRLQAAGHAA
VDARRFRPNI VIEGLEAHDE DRVDGLDVLD AQGLRLRMAK PCTRCPIPDI DPVTAVQGTA
VGDAIRTYRQ DDRVDGAITF GMNAVLEGLH DGAELVVGQS VAGDWQFA