Gene Daci_1529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1529 
Symbol 
ID5747086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1716530 
End bp1717309 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content66% 
IMG OID641296610 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001562558 
Protein GI160896976 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.338476 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCTATG AAATGATTGA AGTTCGCGTC GAAGCCGACA AGGTCGGCAT CATCACGCTC 
AACCGCCCCA AGCAGCTCAA CGCGCTCAAC GACCAGCTCA TGGACGAGCT GGGCCAGGCC
CTGCAGGCCT TCGATGCCGA TGAGGCCATC GGCTGCATGA TCATCACCGG CAGCGAGAAA
GCCTTCGCGG CTGGCGCCGA CATCGGCGCC ATGGCCAAGT ACAGCTTTGC CGACGCCTAC
AAGGGCGACT ACATCACGCG CAACTGGGAA GCCATCCGCT CCATCCGCAA GCCCGTGATC
GCCGCCGTCA GCGGCTTTGC CCTCGGCGGC GGCTGCGAGC TGGCCATGAT GTGCGACTTC
ATCATCGCCG CCGACAACGC GAAGTTCGGC CAGCCGGAAA TCAAGCTGGG CGTGATCCCC
GGCGCCGGCG GCACGCAGCG CCTGCCGCGC GCCGTGGGCA AGTCCAAGGC CATGGACATG
GCCCTCACGG CCCGCATGAT GGACGCCACC GAGGCCGAGC GCGCCGGCCT GGTCAGCCGT
GTCGTGCCCT TCGACAAGCT CATGGACGAA GCCCTGGGCG CCGCCATCAT CATCAGCGGC
TTCTCGCAGA TCGCCGTCAT GGCGGCCAAG GAATCGGTGA ACCGTGCCTT CGAGGGCTCG
CTGGCCGACG GCGTCATGTT CGAGCGCCGC CTGTTCCACG CGCTGTTCGC CACGCAGGAC
CAGAAGGAAG GCATGGACGC CTTCGTCAAC AAGCGTCCCG CCAGCTTCAA GCATCTCTGA
 
Protein sequence
MAYEMIEVRV EADKVGIITL NRPKQLNALN DQLMDELGQA LQAFDADEAI GCMIITGSEK 
AFAAGADIGA MAKYSFADAY KGDYITRNWE AIRSIRKPVI AAVSGFALGG GCELAMMCDF
IIAADNAKFG QPEIKLGVIP GAGGTQRLPR AVGKSKAMDM ALTARMMDAT EAERAGLVSR
VVPFDKLMDE ALGAAIIISG FSQIAVMAAK ESVNRAFEGS LADGVMFERR LFHALFATQD
QKEGMDAFVN KRPASFKHL