Gene Daci_1526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1526 
Symbol 
ID5747082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1712447 
End bp1713958 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content70% 
IMG OID641296606 
Producthypothetical protein 
Protein accessionYP_001562555 
Protein GI160896973 
COG category[C] Energy production and conversion 
COG ID[COG3488] Predicted thiol oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0390784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTCT CCCCATCGCT GCTGGTCGCT GCTTCCCTGG TCCTGATGGG CTGCTCGGCC 
CAACAGCAGG ACACGGTGGC TGCCGCGCCA GCGCGCGCGC CAGCACCGCA GCCTGCTCCC
GATCCAGCTC CCGATCCAGC TCTTTTGTTC GCGGCACCCG GCGAGCCCCT GCCCCCGGGT
GGCCAGACCA CGGTCCACGC CACGGGCCGC AACGCCTTCT CGCTGCCCGC CGCCAACCTG
GAGGATGCAG AGCGCACGCG CTTCGTCATC GGCAACTCCT TCTTCAAGCG CAACTGGGTG
CAGGCGCCGG CCTCCACCAC GGCGCGCGAT GGCCTGGGCC CGCACTTCCT GGCGCGCTCC
TGCGGCGGCT GCCATGTGCA GGACGGCCGT GCCCAGCCGC CCGACTTCCA CAACCCGCTC
AAGCCCCAGC CCTTCGCGGG CCTGCTCATG CGGCTGTCCA TTCCGGGCGA AGGCCCGCAC
GGCAGCCCGG TGCCGGACCC GGTCTATGGT GACCAGTTCA ACACCGAGGG CGTGCTGGGC
GTCAAGGGCG AGGGCCAGCT GCGCATCCGC TACGAACAGG TGCATGGCCG CTTTGCCGAC
GGCACGGCCT ACACGCTGGA AAAGCCGGTC TACGAGCTGG CTGCGCTCAA CTACGGCCCC
CTGGCCGCCA ACCTGATGAC CAGCCCGCGC ATTGCGCCCC AGGTCATCGG CCTGGGCCTG
CTGGAGCACA TCCCGGAGTC CGAGATCCTG GCCAACGCTG CCGCCCAGGC GGCCCTGGGC
GGCCCCATCA AGGGCCAGCC CAACTATGTC TGGGATGCCT ACGGCGAACG CATGATGCTG
GGCCGCTTCG GCTGGAAGGC CAACGTGGCC TCCATTGCCC ACCAGACGGC CTCGGCCTTC
CTGGGCGATA TCGGCATCAC ATCGAAGCGT TTCCCGCACC AGACCTGCAC TCCCGCACAA
AAGGACTGCC TGGCCGCGCC CAACGGCAAC GGCGCCGAGG GCGTGGAGAT CGAGGACCGC
GTGCTGGACG ACGTGATCTT CTACCAGGCC ACGCTGGCGC CGCCTGCACG GCGCAACGCC
AGCGACCCGG CCGTGCGCCG TGGCGAGGCA CTGTTCCACC AGGCCCAGTG TGCGCAGTGC
CACCGGCCCT CGTACAAGAC GGGTGGGGAG CTGTTTCCCG CGCTGTCGCC GGCACTCAGC
AGCAAGGGGT TGTCGGGCCA GACCATTGCG CCCTACACCG ACCTGCTGCT GCACGACATG
GGCGATGCGC TGGCCGATGG CCGGCCCGAC TTCAAGGCCT CAGGCCGCCA GTGGCGCACG
CCGCCGCTGT GGGGCATAGG CCTGCTGCCC GATGTCAACA ACCACCAGCG CCTGCTGCAC
GACGGCCGTG CGCGCGGCGT GCTCGAAGCC ATCCTCTGGC ACGGCGGCGA GGCCGAAGCC
GCGCGCGAAC AGGTGCGCCA GCTCAGCGCC GAAGACCGTG AAGCCCTGGT CAAATTTGTG
GAGTCCCTCT GA
 
Protein sequence
MNLSPSLLVA ASLVLMGCSA QQQDTVAAAP ARAPAPQPAP DPAPDPALLF AAPGEPLPPG 
GQTTVHATGR NAFSLPAANL EDAERTRFVI GNSFFKRNWV QAPASTTARD GLGPHFLARS
CGGCHVQDGR AQPPDFHNPL KPQPFAGLLM RLSIPGEGPH GSPVPDPVYG DQFNTEGVLG
VKGEGQLRIR YEQVHGRFAD GTAYTLEKPV YELAALNYGP LAANLMTSPR IAPQVIGLGL
LEHIPESEIL ANAAAQAALG GPIKGQPNYV WDAYGERMML GRFGWKANVA SIAHQTASAF
LGDIGITSKR FPHQTCTPAQ KDCLAAPNGN GAEGVEIEDR VLDDVIFYQA TLAPPARRNA
SDPAVRRGEA LFHQAQCAQC HRPSYKTGGE LFPALSPALS SKGLSGQTIA PYTDLLLHDM
GDALADGRPD FKASGRQWRT PPLWGIGLLP DVNNHQRLLH DGRARGVLEA ILWHGGEAEA
AREQVRQLSA EDREALVKFV ESL