Gene Daci_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1519 
Symbol 
ID5747075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1705658 
End bp1706338 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content68% 
IMG OID641296599 
Productmolybdate ABC transporter, inner membrane subunit 
Protein accessionYP_001562548 
Protein GI160896966 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4149] ABC-type molybdate transport system, permease component 
TIGRFAM ID[TIGR02141] molybdate ABC transporter, permease protein 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.046514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTTA CCGCCGACGA CTACGCCGCC ATACGGCTGA CGCTGAAACT TGCCAGCGTG 
ACCACGGTGG TGCTGCTGAC GCTGTGCACG CCGCTGGCCT GGTGGCTGGC GCATACGCGC
TCGCGCTGGC GCGGGCCGAT TGGCGCCGTG GTGGCGCTGC CCCTGGTGCT TCCGCCCACG
GTGATCGGTT TTTACCTGCT GGTGACCATG GGTCCCAACG GCCCCGTGGG GCAGCTGACG
CAGGCGCTGG GGCTGAGCAC CCTGCCCTTC ACTTTTCCGG GCCTGGTCAT CGGTTCGCTG
GTCTATTCCA TGCCGTTCAC GGTGCAGCCG CTGCAGCGCG CCTTCGAATC CCTGGGCACG
CGGCCCATGG AGGCTGCGGC CAGCCTGGGC GCGGGGCCGC TGGACCGCTT CTTCACCGTG
GCGCTGCCGC TGGCGCGGCC GGGCTTCATC ACGGCGGCCG TGCTGACCTT TGCGCACACC
GTGGGCGAGT TCGGCGTGGT GCTGATGCTG GGCGGCAATA TTCCCGGCGT GACGCGCGTG
GTCTCGGTAC AGATCTACGA CCATGTGGAG GCCATGGAGT ACGCCCACGC CCACTGGCTG
GCGGGCGGCA TGGTGGTGTT CTCCTTCCTG GTTCTTCTGG CCCTGCACCT GTTGCAGCCG
CGTGAGGAGC GCCGCGCATG A
 
Protein sequence
MILTADDYAA IRLTLKLASV TTVVLLTLCT PLAWWLAHTR SRWRGPIGAV VALPLVLPPT 
VIGFYLLVTM GPNGPVGQLT QALGLSTLPF TFPGLVIGSL VYSMPFTVQP LQRAFESLGT
RPMEAAASLG AGPLDRFFTV ALPLARPGFI TAAVLTFAHT VGEFGVVLML GGNIPGVTRV
VSVQIYDHVE AMEYAHAHWL AGGMVVFSFL VLLALHLLQP REERRA