| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1515 |
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| Symbol | |
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| ID | 5747071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1701578 |
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| End bp | 1702906 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641296595 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_001562544 |
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| Protein GI | 160896962 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.561512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.183018 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGA AAGTCTTTAT CAAAACCTTC GGCTGCCAGA TGAACGAGTA CGACTCGGAC
AAGATGGCCG ATGTGCTGGG CGCAGCCCAG GGCTACGAAT CCACCGATGA CCCGGAGCAG
GCCGACCTGA TCCTGTTCAA CACCTGCTCG GTGCGCGAGA AGGCGCAGGA GAAGGTGTTC
AGCGACCTGG GCCGCTACAA GCACCTGAAG GAACGCGGCG TGCTCATCGG CGTGGGCGGC
TGCGTGGCCA GCCAGGAGGG CGAGGAAATC ATCAAGCGCG CGCCCTATGT GGACGTGGTC
TTCGGCCCGC AGACCCTGCA CCGCCTGCCC GAGCTGCTCA ATGCACGCGC CGCCAAGCAC
AAGCCCCAGG TCGATATCAG CTTTCCCGAG ATCGAGAAAT TCGACCACCT GCCGCCCGCG
CGCGTGGAAG GCTCCTCGGC CTTCGTCTCC ATCATGGAAG GCTGCTCCAA GTACTGCAGC
TACTGCGTCG TGCCCTATAC GCGCGGCGAG GAAGTCAGCC GCCCGTTCGA GGACGTGCTG
ATCGAGGTCG CCGGCCTGGC CGACCAAGGC GTGAAGGAAG TCACGCTGCT GGGCCAGAAC
GTCAACGCCT ACCTGGGCAA GATGGGTGAC ACGGCCGAGA TCGCCGACTT TGCCCTGCTG
CTGGAGTACG TGTCCGAGAT CCCCGGCATC GAGCGCATCC GCTACACCAC CAGCCACCCC
AACGAGTTCA CGCCGCGCCT GATCGAGGCC TACGCTCGGC TGCCCAAGCT GGTCAGCCAC
CTGCACCTGC CCGTGCAGCA TGGTAGCGAC AAGATCCTCA TGGCCATGAA GCGCGGCTAC
ACGGCCATGG AATACAAGAG CACCATCCGC AAGCTGCGCG CCATCCGGCC CGAGATGGCC
ATGAGCAGCG ACTTCATCGT GGGCTTCCCC GGCGAGACCG AGGAAGACTT CCAGAAGATG
ATGAAGCTCA TCCACGACGT GCGCTTCGAC AACAGCTTCA GCTTCATCTT CAGCCCCCGC
CCCGGCACGC CGGCCGCCAA CCTGCACGAC GACACGCCGC ACGAGGTCAA GCTGCGCCGC
CTGCAGGAGC TGCAGGCCGT GATCAACAAC AACATCAAGG ACATCAGCGA CGAGCGCGTG
GGCACGGTGC AGCGCCTGCT GGTGGAAGGC CTGTCCAAGC GCGATGGCAG CGAACTCATG
GGCCGCACCG AGTGCAACCG CGTGGTCAAT TTCCCGGGCA ACGAACGCCT GATCGGCCAG
ATGATCGATG TGAAGATCAC CGAGGCCCGC ACCTTCACGC TGCGCGGCGA AGTCGTGGTG
CGCCACTGA
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| Protein sequence | MSKKVFIKTF GCQMNEYDSD KMADVLGAAQ GYESTDDPEQ ADLILFNTCS VREKAQEKVF
SDLGRYKHLK ERGVLIGVGG CVASQEGEEI IKRAPYVDVV FGPQTLHRLP ELLNARAAKH
KPQVDISFPE IEKFDHLPPA RVEGSSAFVS IMEGCSKYCS YCVVPYTRGE EVSRPFEDVL
IEVAGLADQG VKEVTLLGQN VNAYLGKMGD TAEIADFALL LEYVSEIPGI ERIRYTTSHP
NEFTPRLIEA YARLPKLVSH LHLPVQHGSD KILMAMKRGY TAMEYKSTIR KLRAIRPEMA
MSSDFIVGFP GETEEDFQKM MKLIHDVRFD NSFSFIFSPR PGTPAANLHD DTPHEVKLRR
LQELQAVINN NIKDISDERV GTVQRLLVEG LSKRDGSELM GRTECNRVVN FPGNERLIGQ
MIDVKITEAR TFTLRGEVVV RH
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