Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1508 |
Symbol | |
ID | 5747064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 1690392 |
End bp | 1694303 |
Gene Length | 3912 bp |
Protein Length | 1303 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641296588 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_001562537 |
Protein GI | 160896955 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGATA CGCCGTATCG CCAGTTCCTG GACCGTGTGC CCGACGGTTT TCTTCTGTTT GACGAGCAGG GCGGCCTGCT CGATGCCAAT GCCCAGGCCT GCGCCAGCCT GGGCCATCAC AAGGCCGCCA TGCTGGGGCT GGGCATCATG GACCTATGGC TGGACCCGGA TGGACGGCCG CGTGATTTCT GGCGGGACAT GGTCGTGGAC AGCCAGGCCC TTCTGCGAGG CCGGCTGATC CGCCGCGATG GCAGCAGCTT GCCCGCCGAG ATCCATGTCC ATTGCCTGTC ACTGTCGGGC AGGCGGCTTT TCTTCACTAC CTGGCACGAC CTCAGCGAGC GCACCGGCCA GGACGAGCAG ATCGGCCAGC CCAATGCGCA GCTTGAGCCG CACCTGCAAA ACCGCACCTG GCCGTGGCAG GACTCGACGC GCCTGCTGGA GACCGTGATG CGCGAGACGC CCGACCTGGT CTTCGCCAAG GACCGGCAGG GCCGCTACAC CTTCGCCAAC CCCGCCACAG CGCGCTTTGC CGGACGCGCG CCCGAAGACA TCGTGGGCAA GACCGACCAG GAGCTTTTCT CCGACAGCAG CTTCACCGAC AGCGACCGCC GGGTGCTGGA CAGCGATGCG CCCGTGGTGA TGGACGATCA TTTGCTGGTC GACGGGCAGC GCCGCATCTT CCAGTCCACC AAGATTCCCT ATCGCGATGC CGAGGGCCGG ACCGTGGGCG TGCTGGGCAT TGCGCGCGAC ATCACCCTCA TGCGCCAGAC CGAGTCCCAG CTGCAAAAAA GCTACGACGT GCTGCGCCAG GCCGAACAGC TGGCGCGCCT GGGCAGCTGG ACATGGGAAC TGGACACCGG GCACTTTCAG GCTTCGGAGA TGATGTATGT GATGAACGGC CTGGACCCCC AGGGTCCGCC ACTGACGCGC CATGCCCTGC GCGCCATGCT CGGGCCGCAG GATCTTGCCC GGCTCACCGC TGCCGTGGAT CTGTGCATCA GCACCGGCCA GTCCTACAGC ATCGATGTGG TCCAGCGCTG CCCGGACGGC CGGCAGTTCG CTGCCCGCCT CATGGGCCGG GCCCTGCGCG ACGAGCAAGG CCGCATCGTC GCGCTCAGCG GCACGCTGCA GGACCTGTCC GAACGCGAGG ACGCGCGCAT GCGCCTCGAA GCCCTGGCCG ACAACCTGCC CAGCGGCGCC ATCTACCGCC TGGAAGGCGG CTTGACACAA CTGCGGCTCA GCTACATCAG CGCCGGCATA GAGAACCTGA TCGGCGTGCC GGCCCACGCC ATCATGGCCG ATCGGCAGGT CTACCTGAAT GCCATCCATC CCGAGGACCT GCCGCTCTAC CAGGGGATGA TGCAACGCTC GATCGATACG CTGCGGGTCT TCGATTGCCG CTTTCGCGTG ATCAGGCCCG ACGGAGAGAT CCGCTGGCTG CGCTGCCGCT CGGCTCCCCG GCGCTGTCAG GAGGGCATGG TCTGGGACGG CATCATGCTG GACATCACCC GCGAACGCGA GGCCGAGCAG GCGCTGCAGC AGGCCAAGGA AGCCGCCGAA GCGGCCGAAC GCGCCAAATC GGATTTCCTG GCCATCATGA GCCACGAAAT CCGCACACCC ATGAATACCG TCATCGGCAT GACGCGCCTG GTGCAGCAGA CCGCGCTGAC ATCGCGCCAG CGCGGCTACC TGGAGAAGGT GGAGCGCTCG GCCAGCGCCC TGCTGGCCGT GATCAACGAC ATCCTCGATT TCTCCAAGAT AGAGGCGGGC ATGCTGGTGC TGGAGGAGGT GGACTTCGCC CTTGACGATG TGCTGGAGAC CGTGACGGCC TCCACGGCGC TGCGCGCAGA GGAAAAGGGG TTGGAAGTGG TCTATGCGCT GGACCCGCAG CTGCCGCCCC GTTTGCGCGG CGACCCAATG CGCCTGGGCC AGGTGCTGAC CAACCTGGTC GGCAACGCCG TCAAGTTCAC CGAGCATGGC GAGGTGGTGA TCTCCCTGCA TCTGGCGCCG CCGCCGGTGG ACGCGCCTGC GGATGCCGAT GCGGACACCA CGGCAGCGCC CCTGCACCAC CTGTGCGTGA GCGTGCGCGA CACCGGCATA GGCCTGGATG CATCGCGGGC CGAGCGGCTG TTCCAGCCCT TCACCCAGGC CGACATCCAG ACCACGCGCC GCCACGGCGG CACCGGCCTG GGCCTGGCCA TCTGCCACAG GCTGGTGCAG CTCATGGGCG GCGAGATCGG CGTGCGCAGC CAGCCCGGCC AGGGCAGCGA CTTCCGCTTC ACGGCCAAGG TCCGGCTTGC CACGGATGCG CTGCCGGACG GCCACGACAA CCTGGGCAGC ACCGGCGTTC TCATCGTCGA TGACAACGCC AGCGCGCGCG AGGCGCTGGC CGCCATGGTG CGCAAACTGG GCATGCGCTG CGATACGGCG GCGGACGGCA TGCAGGCGCT GCGCATGCTT CAAGAGGCCG CACGCCAGGA ATCCCCCTAT GGCCTGGCCC TGCTGGACTG GCGCATGCCC GGCATGGACG GACTGGAGCT GGCACGCCGC ATGCGCGAGC GACAGGACCT GGTCAAGACC CCGGCCGCGC TCATGGTCAC GGCCTTCGGG CGCGACGAAG TGCAGCTGCG TGCCGCGCAG TTTGGCCTGC GGGGCCTGCT GATCAAGCCC CTGACCGCAT CGGCATTGCG GTCCTCCATC CGTGAGGCGC TGCGGGACCC CGAATCGACC CAGCCTCAAG ACCCGGCGGC CGGCCCGTCG CCACAGCAGC GCTACCCGGG CCTGCCTGGG CGCAGGGTGC TGGTGGTGGA TGACAACGTG CTCAACCGCG AGGTGGCCAC CGAGCTGCTG GAGCAGGCCG GCATATCGGT ACAGACTGCG CAAGACGGTC TGCAGGCGCT GCAGCTGCTC GACAGCCAGC CTTTCGATGC CGTGCTCATG GACGTGCACA TGCCCGGCAT GGACGGCCTC AGTGCCACGC GTGCCCTGCG CACGCGCAGC GCGCTGCGGC ATCTTCCGGT GATCGCGCTG ACTGCACAGG CCTATGTCGA GGAGCGCGCC CGGATCGAGG CCGCAGGCAT GAATGCCCAT CTGACCAAAC CCGTTGACGA TGTGCTGCTG TACGAGACGC TGCAGCGCTG CCTGCGCGCA GCCCCCCCGA CAACGGCAGC GCCTGCGCCG GCCCCGCCCT CCCGGCCCAC GCCCCCAGCC CCTGCCCCGG CCTGGGATCC TGTGCAGCTG CGGCAACGCC TTGCCAGCCA ATCGCCGCGC ATGCAGCATG CGATCGAAGG CTTTGCCCAG GACTTTGCCG ATGCGCCGCA ACAGCTGCGC CGCGCCGCGC GCAGCGGCAA CTGGGCAACC GTGGCGTCGC TGGCGCATAC CTTCAAGGGC AGCCTGGGCT ACCTGGGCGC GAACCTGCTG GAGCAATGGT CGGCCATGGC CGAGACCGGC GCGCATGCCT GCATGTCAGG CGACGGCAAG GGCGGGAATG CCCGGCCCAG CGGTGATCTG CCATCCCTGG TGCAGGCGCT GGCCGATGGG CTGCAGGGCC TGCTGGCGGA AATCGCCGTG CGGTCCAGGC AGGCGGCCTT GCCACCCCTG GCCACGGTGT CCAGCGCTGC GCCCTCGCAG CAGCGGCAGC GGCAGCAGCG GCAGCGGCGG CCGATGACCG CAGAGGAAGT CTCATCCACG CTGGCTCGGC TGCGGCGGCA GATTGCCGAC AGCGACTATG CCGCCGTGGC CGAACTGGAA CGGCTGCGGC CCCTGGTCAG CGGGCGCCAT GCGTCCGTGC TGCAGCGCAT CCAGCGCTGC ACCGAGTCCC TGGAAACCGA GGCGGCGCTG CAGGCGCTCG ATCAGCTGGC GCGGAGCATG GCCGCGAACC GGATGGCCCC ACAGGGAGCT GCAGATGCTT GA
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Protein sequence | MPDTPYRQFL DRVPDGFLLF DEQGGLLDAN AQACASLGHH KAAMLGLGIM DLWLDPDGRP RDFWRDMVVD SQALLRGRLI RRDGSSLPAE IHVHCLSLSG RRLFFTTWHD LSERTGQDEQ IGQPNAQLEP HLQNRTWPWQ DSTRLLETVM RETPDLVFAK DRQGRYTFAN PATARFAGRA PEDIVGKTDQ ELFSDSSFTD SDRRVLDSDA PVVMDDHLLV DGQRRIFQST KIPYRDAEGR TVGVLGIARD ITLMRQTESQ LQKSYDVLRQ AEQLARLGSW TWELDTGHFQ ASEMMYVMNG LDPQGPPLTR HALRAMLGPQ DLARLTAAVD LCISTGQSYS IDVVQRCPDG RQFAARLMGR ALRDEQGRIV ALSGTLQDLS EREDARMRLE ALADNLPSGA IYRLEGGLTQ LRLSYISAGI ENLIGVPAHA IMADRQVYLN AIHPEDLPLY QGMMQRSIDT LRVFDCRFRV IRPDGEIRWL RCRSAPRRCQ EGMVWDGIML DITREREAEQ ALQQAKEAAE AAERAKSDFL AIMSHEIRTP MNTVIGMTRL VQQTALTSRQ RGYLEKVERS ASALLAVIND ILDFSKIEAG MLVLEEVDFA LDDVLETVTA STALRAEEKG LEVVYALDPQ LPPRLRGDPM RLGQVLTNLV GNAVKFTEHG EVVISLHLAP PPVDAPADAD ADTTAAPLHH LCVSVRDTGI GLDASRAERL FQPFTQADIQ TTRRHGGTGL GLAICHRLVQ LMGGEIGVRS QPGQGSDFRF TAKVRLATDA LPDGHDNLGS TGVLIVDDNA SAREALAAMV RKLGMRCDTA ADGMQALRML QEAARQESPY GLALLDWRMP GMDGLELARR MRERQDLVKT PAALMVTAFG RDEVQLRAAQ FGLRGLLIKP LTASALRSSI REALRDPEST QPQDPAAGPS PQQRYPGLPG RRVLVVDDNV LNREVATELL EQAGISVQTA QDGLQALQLL DSQPFDAVLM DVHMPGMDGL SATRALRTRS ALRHLPVIAL TAQAYVEERA RIEAAGMNAH LTKPVDDVLL YETLQRCLRA APPTTAAPAP APPSRPTPPA PAPAWDPVQL RQRLASQSPR MQHAIEGFAQ DFADAPQQLR RAARSGNWAT VASLAHTFKG SLGYLGANLL EQWSAMAETG AHACMSGDGK GGNARPSGDL PSLVQALADG LQGLLAEIAV RSRQAALPPL ATVSSAAPSQ QRQRQQRQRR PMTAEEVSST LARLRRQIAD SDYAAVAELE RLRPLVSGRH ASVLQRIQRC TESLETEAAL QALDQLARSM AANRMAPQGA ADA
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