| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1501 |
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| Symbol | |
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| ID | 5747057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1680936 |
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| End bp | 1683857 |
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| Gene Length | 2922 bp |
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| Protein Length | 973 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641296581 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001562530 |
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| Protein GI | 160896948 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGAAG CACTGAATTC TTTGGCTCCC GCTGCGCACG GTGATGCTGC CAATCCTTCC
TCCGCCCATC ACCTGTCCGT GCAGGACGGC TACCAGATCA TCCGCCGCAG CGGCGATGTG
GTGCCCTTCA CGCCGCAAAA GATCGCCGTC GCACTGACCA AGGCCTTCCT GGCCGTGCGC
GGTGCCCAGG GCGCGGCCTC CGCCAGCGTG CGCGAGACCG TGGACGAGCT GACCCAGGCC
GTGGTTCGCG CACTGCTGCG CTCGCGTCCG GGCGGCGGCA CCTTCCATAT TGAAGATGTG
CAGGACCAGG TCGAACTGGG CCTGATGCGC GGCGGCCACC ACGACGTGGC ACGCGCCTAC
GTGCTGTACC GCGACCGCCG CAACCAGGAA CGTGCCGAGC AAAAGAAGGC CGCCGAGGCC
GCTGCCGCTG CTGCCGCCGC ACCGGCGCCC GTGCTGCATG TGACCGACAA CGGCCAGCGC
GTGCCGCTGG ACCAGGCCCG CCTGCTGGCG CTGATCGAGG CGTCCTGCCG CAACCTCAAC
GCCGATATCC AGGCCGCCCC CATCGTCGCC GAGACGCTGC GCAACCTGTA CGACGGCGTG
CCGATCGAAG AAGTCTTCAA GGCCTCCATC CTGGCCGCTC GCACGCTGAT CGAAAAAGAC
CCCGACTACA CCTACGTCAC CGCCCGCCTG CTGCTGCACA CGATCGTGCG CGAGGTCATG
GGCCGCGACG TGCAGCCGGC CGACATCCAG GCGGCCTACG CAGAGTACTT CCCCGGCTTC
ATCCGCAAGG GCGTGGACAA CGAGCTGCTC AACCCCGAGC TGCTGAACTA CGACCTGCCC
CGCCTGGCTG CCGCCATCAA GGCCGAGCGC GACGAGCAGT TCGACTACCT GGGCCTGCAG
ACCCTGTACG ACCGCTACTT CCTGCACGTG CGCAAGACGC GCATCGAGCT GCCCCAGTCC
TTCTTCATGC GCGTGGCCAT GGGCCTGGCG CTGCAGGAAG AGGACCGCAA TGCGCGCGCC
ATCGAGTTCT ACGAGCTGCT GTCGTCCTTC GACTTCATGA GCAGCACGCC CACGCTGTTC
AACAGCGGCA CGCTGCGCTC GCAGCTGTCT TCCTGCTACC TGACCACGGT GCCCGACGAT
CTGGACGGCA TCTATGAGTC CATCAAGGAA AACGCCCTGC TGTCCAAGTT CGCCGGCGGC
CTGGGCAACG ACTGGACGCG CGTGCGCGCC CTGGGTTCGC GCATCAAGGG CACGAACGGC
GAGTCGCAGG GCGTGGTGCC CTTCCTCAAG GTGGTCAACG ACACGGCCGT GGCCGTGAAC
CAGGGCGGCA AGCGCAAGGG CGCCGTCTGC ACCTACCTGG AGACCTGGCA CCTGGACATC
GAGGAATTCC TCGAACTGCG CAAGAACACC GGCGACGACC GCCGCCGCAC GCACGACATG
AACACGGCGA ACTGGATTCC CGACCTGTTC ATGAAGCGCG TCATGGAAAA GGGCCACTGG
ACCCTGTTCT CGCCCTCCGA TGTCGGCGAC CTGCACGACC TCTTCGGCGC CGCCTTCGAG
CACGCCTACA CGGCCTACGA AACCAAGGCC GACAACGGCG AACTCAAGCT GTTCAAGCGC
ATCCCGGCCA TGGACCTGTG GCGCAAGATG CTGTCCATGC TGTTCGAGAC CGGCCACCCC
TGGGTCACCT TCAAGGACCC CTGCAACGTG CGCTCGCCCC AGCAGCACGC CGGCGTGGTG
CACTCGTCCA ACCTGTGCAC CGAGATCACG CTGAACACCA GCGACACCGA GACCGCCGTC
TGCAACCTGG GCTCGGTCAA CCTGGCGCGC CACATCGTCG ATGGCGCCAT CGACCACGGC
AAGCTGCGCA AGACCATCAC CACGGCCATG CGCATGCTGG ACAACGTGAT CGACATCAAC
TACTACGCCG TGCAGAAGGC CAAGGACTCC AACCTGCGTC ACCGCCCCGT GGGCCTGGGC
CTGATGGGCT TCCAGGATGC GCTCTATGAA ATGCGCATCG CCTACGCCAG CGACGCGGCC
GTCGAGTTCG CCGACCAGTC GATGGAAGCC ATCTGCTACT ACGCCTACTG GGCCTCCACC
GAGCTGGCCA AGGAACGCGG CCAGTACTCC AGCTACAAGG GCTCGCTGTG GGACCAGGGC
ATCCTGCCGC TGGACACGCT GAACCTGCTG GAGAAGGCAC GCGGCGGCTA TGTGGAAGTG
GACCGCTCCT CGCGCCTGGA CTGGGATGCC CTGCGCGCCA AGATCGGCCA GCACGGCATG
CGCAACTCCA ACTGCGTGGC CATCGCGCCC ACGGCGACCA TCTCCAACAT CGTCGGCGTC
GATGCCTCCA TCGAGCCCTC GTTCGGCAAC CTGTCGGTCA AGTCCAACCT GTCCGGCGAG
TTCACCGTCA TCAACCAGTA CCTGGTGCGT GACCTGAAGC GCCTGGGCCT GTGGGACGAC
GTGATGGTCA TGGACCTCAA GCACTTCGAC GGCTCGCTGC GCCCCATCGA CCGCGTGCCC
CAGGACGTCA AGAGCCTGTA CGCCACCGCC TTCGAGGTCG AGCCCACCTG GCTGGTCGAG
GCCGCTGCGC GCCGCCAAAA GTGGATCGAC CAGGCCCAGA GCCTGAACAT CTACATGGCC
GGTGCATCGG GCAAGAAGCT GGACGACACC TACAAGCTGG CCTGGCTGCG CGGTCTGAAG
ACCACCTACT ACCTGCGCAC CACCAGCGCC ACCAACATCG AGAAGTCCAC GGTGCAAAGC
CGCGTGCTCA ACGCCGTGCC CTCGGCCGCC GCCGCACAGC CTGCCGCCGT GAACACCTCC
AGCGCCCTGG AAGCCGCGGC AGCCGCCGCG CGCGCCCAGG CACCGGCGAC GGACATCAAG
TTCTGCGCCA TCGACGATCC CGGCTGCGAA GCCTGCCAGT AA
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| Protein sequence | MQEALNSLAP AAHGDAANPS SAHHLSVQDG YQIIRRSGDV VPFTPQKIAV ALTKAFLAVR
GAQGAASASV RETVDELTQA VVRALLRSRP GGGTFHIEDV QDQVELGLMR GGHHDVARAY
VLYRDRRNQE RAEQKKAAEA AAAAAAAPAP VLHVTDNGQR VPLDQARLLA LIEASCRNLN
ADIQAAPIVA ETLRNLYDGV PIEEVFKASI LAARTLIEKD PDYTYVTARL LLHTIVREVM
GRDVQPADIQ AAYAEYFPGF IRKGVDNELL NPELLNYDLP RLAAAIKAER DEQFDYLGLQ
TLYDRYFLHV RKTRIELPQS FFMRVAMGLA LQEEDRNARA IEFYELLSSF DFMSSTPTLF
NSGTLRSQLS SCYLTTVPDD LDGIYESIKE NALLSKFAGG LGNDWTRVRA LGSRIKGTNG
ESQGVVPFLK VVNDTAVAVN QGGKRKGAVC TYLETWHLDI EEFLELRKNT GDDRRRTHDM
NTANWIPDLF MKRVMEKGHW TLFSPSDVGD LHDLFGAAFE HAYTAYETKA DNGELKLFKR
IPAMDLWRKM LSMLFETGHP WVTFKDPCNV RSPQQHAGVV HSSNLCTEIT LNTSDTETAV
CNLGSVNLAR HIVDGAIDHG KLRKTITTAM RMLDNVIDIN YYAVQKAKDS NLRHRPVGLG
LMGFQDALYE MRIAYASDAA VEFADQSMEA ICYYAYWAST ELAKERGQYS SYKGSLWDQG
ILPLDTLNLL EKARGGYVEV DRSSRLDWDA LRAKIGQHGM RNSNCVAIAP TATISNIVGV
DASIEPSFGN LSVKSNLSGE FTVINQYLVR DLKRLGLWDD VMVMDLKHFD GSLRPIDRVP
QDVKSLYATA FEVEPTWLVE AAARRQKWID QAQSLNIYMA GASGKKLDDT YKLAWLRGLK
TTYYLRTTSA TNIEKSTVQS RVLNAVPSAA AAQPAAVNTS SALEAAAAAA RAQAPATDIK
FCAIDDPGCE ACQ
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