Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1488 |
Symbol | |
ID | 5747044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 1667808 |
End bp | 1668965 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641296568 |
Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
Protein accession | YP_001562517 |
Protein GI | 160896935 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCTC ATCAAGCTTC CCTCGCCGAT TCCTGGTATC GCGGCGGTTC CCAAAAGACT GGCCAAACCG ACGACGCACG TATCAAGGAC ATCACCGTGT TGCCCCCTCC CGAGCACCTC ATTCGCTTCT TCCCCATCCG CGGTACGGCC GTCGAAACCC TGATCGGCGA CACCCGCCGC ACCATCCACA ACATCATGGC TGGCGAGGAT GACCGCCTGC TGGTCATCGT CGGCCCCTGC TCCATCCACG ATCCGGCGGC CGCCATCGAG TACGCACGCC GCCTGGCGCC CATACGCGAG CAGTACAAGG ACACGCTGGA GATCGTGATG CGCGTGTACT TCGAAAAGCC GCGCACCACC GTGGGATGGA AGGGTTTGAT CAACGATCCC TACCTGGACC AGAGCTACCG CATCGACGAA GGCCTGCGCA TTGCGCGGCA ACTGCTGATC GACATCAACC GCCTGGGCGT GCCGGCCGCC AGCGAGTTCC TGGACGTGAT CTCGCCCCAG TACATTGCCG ATCTGATCAG CTGGGGCGCC ATCGGTGCGC GTACCACGGA AAGCCAGGTC CACCGTGAAC TGGCCTCGGG CATCTCGGCG CCCATCGGCT TCAAGAACGG CACGGACGGC AACATCCGCA TCGCCACCGA CGCCATCCAG TCGGCCAGCC GCGGCCACCA CTTCCTGTCC GTGCACAAGA ATGGCCAGGT TGCCATCGTG AACACGGCGG GCAACCAGGA TTGCCACGTC ATCCTGCGCG GCGGCAAGAC CCCCAACTAC GACGCGGCCA ACGTGGCCGC TGCCTGCGAG GATCTGGAAA AGGCCGGCCT GCCTCCCACG CTGATGGTGG ACTGCAGCCA CGCCAACAGC TCCAAGCAGC ACGAGCGCCA AAAGGATGTG GCACGCGACA TCGCCGGACA GATCAGCGGC GGTTCGCGCA GCGTCTTCGG CGTGATGATC GAAGGCCATC TCGTGGGCGG CGCCCAGAAG TTCACGCCCG GCAAGGATGA GGTGGCTGCG CTGACCTATG GCCAGAGCAT CACCGATGCC TGCCTGGGCT GGGATGATTC CCTGGCAACG CTGGCCGAGC TGTCCGACGC CGTGCAGCAG CGCCGCGTCA AGCATCCCGA GCCGGCTGCG GCCCTGGTTG CCGCCTGA
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Protein sequence | MTAHQASLAD SWYRGGSQKT GQTDDARIKD ITVLPPPEHL IRFFPIRGTA VETLIGDTRR TIHNIMAGED DRLLVIVGPC SIHDPAAAIE YARRLAPIRE QYKDTLEIVM RVYFEKPRTT VGWKGLINDP YLDQSYRIDE GLRIARQLLI DINRLGVPAA SEFLDVISPQ YIADLISWGA IGARTTESQV HRELASGISA PIGFKNGTDG NIRIATDAIQ SASRGHHFLS VHKNGQVAIV NTAGNQDCHV ILRGGKTPNY DAANVAAACE DLEKAGLPPT LMVDCSHANS SKQHERQKDV ARDIAGQISG GSRSVFGVMI EGHLVGGAQK FTPGKDEVAA LTYGQSITDA CLGWDDSLAT LAELSDAVQQ RRVKHPEPAA ALVAA
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