Gene Daci_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1488 
Symbol 
ID5747044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1667808 
End bp1668965 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content65% 
IMG OID641296568 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_001562517 
Protein GI160896935 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTC ATCAAGCTTC CCTCGCCGAT TCCTGGTATC GCGGCGGTTC CCAAAAGACT 
GGCCAAACCG ACGACGCACG TATCAAGGAC ATCACCGTGT TGCCCCCTCC CGAGCACCTC
ATTCGCTTCT TCCCCATCCG CGGTACGGCC GTCGAAACCC TGATCGGCGA CACCCGCCGC
ACCATCCACA ACATCATGGC TGGCGAGGAT GACCGCCTGC TGGTCATCGT CGGCCCCTGC
TCCATCCACG ATCCGGCGGC CGCCATCGAG TACGCACGCC GCCTGGCGCC CATACGCGAG
CAGTACAAGG ACACGCTGGA GATCGTGATG CGCGTGTACT TCGAAAAGCC GCGCACCACC
GTGGGATGGA AGGGTTTGAT CAACGATCCC TACCTGGACC AGAGCTACCG CATCGACGAA
GGCCTGCGCA TTGCGCGGCA ACTGCTGATC GACATCAACC GCCTGGGCGT GCCGGCCGCC
AGCGAGTTCC TGGACGTGAT CTCGCCCCAG TACATTGCCG ATCTGATCAG CTGGGGCGCC
ATCGGTGCGC GTACCACGGA AAGCCAGGTC CACCGTGAAC TGGCCTCGGG CATCTCGGCG
CCCATCGGCT TCAAGAACGG CACGGACGGC AACATCCGCA TCGCCACCGA CGCCATCCAG
TCGGCCAGCC GCGGCCACCA CTTCCTGTCC GTGCACAAGA ATGGCCAGGT TGCCATCGTG
AACACGGCGG GCAACCAGGA TTGCCACGTC ATCCTGCGCG GCGGCAAGAC CCCCAACTAC
GACGCGGCCA ACGTGGCCGC TGCCTGCGAG GATCTGGAAA AGGCCGGCCT GCCTCCCACG
CTGATGGTGG ACTGCAGCCA CGCCAACAGC TCCAAGCAGC ACGAGCGCCA AAAGGATGTG
GCACGCGACA TCGCCGGACA GATCAGCGGC GGTTCGCGCA GCGTCTTCGG CGTGATGATC
GAAGGCCATC TCGTGGGCGG CGCCCAGAAG TTCACGCCCG GCAAGGATGA GGTGGCTGCG
CTGACCTATG GCCAGAGCAT CACCGATGCC TGCCTGGGCT GGGATGATTC CCTGGCAACG
CTGGCCGAGC TGTCCGACGC CGTGCAGCAG CGCCGCGTCA AGCATCCCGA GCCGGCTGCG
GCCCTGGTTG CCGCCTGA
 
Protein sequence
MTAHQASLAD SWYRGGSQKT GQTDDARIKD ITVLPPPEHL IRFFPIRGTA VETLIGDTRR 
TIHNIMAGED DRLLVIVGPC SIHDPAAAIE YARRLAPIRE QYKDTLEIVM RVYFEKPRTT
VGWKGLINDP YLDQSYRIDE GLRIARQLLI DINRLGVPAA SEFLDVISPQ YIADLISWGA
IGARTTESQV HRELASGISA PIGFKNGTDG NIRIATDAIQ SASRGHHFLS VHKNGQVAIV
NTAGNQDCHV ILRGGKTPNY DAANVAAACE DLEKAGLPPT LMVDCSHANS SKQHERQKDV
ARDIAGQISG GSRSVFGVMI EGHLVGGAQK FTPGKDEVAA LTYGQSITDA CLGWDDSLAT
LAELSDAVQQ RRVKHPEPAA ALVAA