| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1484 |
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| Symbol | |
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| ID | 5747040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1660740 |
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| End bp | 1662818 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641296564 |
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| Product | ribonuclease II |
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| Protein accession | YP_001562513 |
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| Protein GI | 160896931 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.35292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCAT TGTTTGAAGA ATCCGGCAAG TTCTTGGCCG GCCGCATCCT CTCCGAAGCC
GACACCTCCG CCCAGGTGGA GCTGGACTCG GGCAAACGGG TCAAGGTCAA GTCGGCCAAC
ATCCTGCTCA AGTTCGACAA GCCGGCGCCT GCCGAACTGA TCGCCCAGGC GCAGGCGCAG
GCCGCCCAGA TCGATCTGGA CCTGGCCTGG GAATTCGCCC CCGAGGAGGA ATTCGGCTTT
GCCGACCTTG CACGCGACTA TTTCTCGGAC AAGGCCACGC TGGCCGAGCA GGCCGGCGCG
CTGTTCCGTC TCTACGATGC ACCGCACTAC TTCCGCCGCT CCGGCAAGGG CCGCTTCAAG
AAGGCGCCGG CCGAGATCCT GCAGCAGGCG CTGGCCGGCA TAGAGAAGAA AAAGCAGATC
CAGGCCCAGA TCACTGCCTG GGCCGAACAG CTGGGCGCCG GCGAATGCCC CGGCCCCATT
CGCGAGCAGC TCTACAAGAT CCTGTTCCGC CCCGACAAGA ACGCCGCCGA ATACAAGGCC
GTGGTCGAGG CCAGCCGCGC CACGCGCCTG GCACCGCTGG ACCTGCTGCA CAGGGCCGGC
GCCATTGAAT CGGCCTACGA GTTCCACTGG AAGCGCTTCC TGTTCGACCA CTTCCCCAAG
GGCACGCAGT TCCCGGCCCT GCAGGCACCC CAGCCACCGG CCGACCTGCC GCTGGCCGAG
GTCCAGGCGT TTTCCATCGA TGACTCGGCC ACCACCGAAA TCGACGATGC GCTGTCGGTG
CGCGGCCTGG GCACGGGCAC GGTCACCGTG GGTATCCACA TTGCCGCGCC CGGTCTGGCC
ATCGTGCCGG GCACGCCGCT GGACCAGCTC GGCCGCTCGC GCCTGTCCAC CGTCTACATG
CCCGGCTACA AGATCACCAT GCTGCCCGAC GAGGTGGTGC AGATCTACAC GCTGGACGAA
GGCCGCGCCA ACCCCGCCGT GTCGCTGTAC GTCACCGTAG ACGAGGCCAC GCTGGAGACC
ACGGCCAGCG AGACGCGCCT GGAGCGCGTG CCCGTGCAGG TCAACTTCCG CCATGACAAG
CTGGACCACA TCGTCACCGA GCAGTGGCTG GCCGACCCCT CCTTCGAGGT CGAGGGCACG
CCCGAAGTGC TGCAAGGCAA GCGCGCCGAA CTGACGTTCC TGCAGCGCTG GGCCAAGCAC
CTGAAGGCTG GGCGCGAACT GGTGCGCGGC AAGCCCGAGA ACTTCAACCG CCCCGACTAC
AACTTCCGCC TCGTGGGCAA CGGCGGCGCC GAGCCTCGCG GCAACGAGCA GGTGGAGATC
AGCGTGCGCA AGCGCGGCGC GCCGCTGGAC CTGATCGTGG CCGAGGCCGC CATCGTGGCC
AACAGCACCT GGGGCGGCTG GATGGCCGAG CTCGGCGTGC CCGGCATCTA CCGCAGCCAG
GCCAGCCTGG CGCCCGGCAT CAAGGTGCGC ATGTCCACCA AGGCGCAGCC CCACGCAGGC
ATCGGCGTCA AGAGCTATGC CTGGGCCACC TCGCCGCTGC GCCGCTACGT GGACCTGGTC
AACCAGTGGC AGATCATTGC CTGCGCGCGC CACGGCAAGA CCGCCGCCCT GGCCGCGCCG
TTCAAGCCCA AGGATGCCGA GCTGTTCGGC ATCATCAGCA GCTTCGACGG TGCCTACAGC
GCCTACAACG GCTACCAGGC CGGCATGGAA CGGTTCTGGA CGCTCAAGTA CCTGCAGCAG
CACGCCATCA CCGAGCTGAC GGCCACCGTC ATCAAGGAAG GCATGGGCGG CGGCCTGCTG
GTGCGCGCCG ATGACCTGCC CCTGGTCTTC CCCGTGCTGG GCGTCACCGG CCTGCCGCGC
GGCGCCCATG TGCGCGTGCG CCTGGGCGAG ATCGACGAGA TCGCGCTCGA TGTCTCGGGC
ACGCTGATCG AGCGCCTGGA TGGCGATGCG GCGGCCGCTG CCGATGGCGC CGAAGACAGC
GCCGAGGATG ACGAGGAAGC CGTGGCCGGC CCCATCGCCA TCGCCGTGGA CATGAACGAG
ACCGATGGCA CACCGGCGGC CGACCCCGCC CAGCCCTGA
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| Protein sequence | MHALFEESGK FLAGRILSEA DTSAQVELDS GKRVKVKSAN ILLKFDKPAP AELIAQAQAQ
AAQIDLDLAW EFAPEEEFGF ADLARDYFSD KATLAEQAGA LFRLYDAPHY FRRSGKGRFK
KAPAEILQQA LAGIEKKKQI QAQITAWAEQ LGAGECPGPI REQLYKILFR PDKNAAEYKA
VVEASRATRL APLDLLHRAG AIESAYEFHW KRFLFDHFPK GTQFPALQAP QPPADLPLAE
VQAFSIDDSA TTEIDDALSV RGLGTGTVTV GIHIAAPGLA IVPGTPLDQL GRSRLSTVYM
PGYKITMLPD EVVQIYTLDE GRANPAVSLY VTVDEATLET TASETRLERV PVQVNFRHDK
LDHIVTEQWL ADPSFEVEGT PEVLQGKRAE LTFLQRWAKH LKAGRELVRG KPENFNRPDY
NFRLVGNGGA EPRGNEQVEI SVRKRGAPLD LIVAEAAIVA NSTWGGWMAE LGVPGIYRSQ
ASLAPGIKVR MSTKAQPHAG IGVKSYAWAT SPLRRYVDLV NQWQIIACAR HGKTAALAAP
FKPKDAELFG IISSFDGAYS AYNGYQAGME RFWTLKYLQQ HAITELTATV IKEGMGGGLL
VRADDLPLVF PVLGVTGLPR GAHVRVRLGE IDEIALDVSG TLIERLDGDA AAAADGAEDS
AEDDEEAVAG PIAIAVDMNE TDGTPAADPA QP
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