| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1483 |
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| Symbol | |
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| ID | 5747039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1659840 |
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| End bp | 1660703 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641296563 |
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| Product | TonB family protein |
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| Protein accession | YP_001562512 |
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| Protein GI | 160896930 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00129671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACTGC CTACCGCCCT CCGTTCCCTG AGCACGCTGC AGTTGGCACT GGGCGTTTCC
ATCGCCCTGC ATGCCGGGTT GTTCTCGTTC CGGTTCATCG ACCCGGAGCG CTTCGACCGC
GTGTTCCAGG ACACGCCGCT GGAAGTCATC CTGGTCAATG CCCGCGCCAA CGAGCAGCCC
GACAAGGCAC AGGCCATCGC GCAGACCTCG CTGGCCGGCG GCGGCGAGGC CGACAAGGGC
CGGGCCTCCA GCCCCATGCC CTACTCGGCA CTCACGGCCG TGGGCGACGA CTTCGAGGAA
CGCCAGCGCC AGATCGACTC CATGCAGGAA CAGCAGACCG TCTTGCTGAC GCAGTTGCGC
AAGCAGGTCG CGGCCCTGCC GCCGCTGGAC CCGCGCGAGG CGGCCAAGCA GACCAAGGAG
CAGCAGGCCC AGCAGGAAAA GCGCCAGCAG CTGGTCAAGC TGCTGGCCGA GATCGAAAAG
CGCATCAACG AGGAAAACGC CCGCCCCAAG AAGCGCTATA TCAGCCCGTC CACGCGCGAG
GCCGTCTATG CCATCTACTA CGACGGCCTG CGCCGCAAGG TCGAGGACAA GGGCACGGAG
AACTTCCCCG AGCAGGCCGG CAAGAAGCTC TATGGCGAGC TGGTCATGAT CCTCACCGTC
AACCACGACG GCCGCGTGCT GTCCACCGAG ATCGTGCAGG GCTCGGGCAA CCGCCTGCTG
GACACCCGCG CCGAGGCCAT TGCGCGTGCG GCCGGCCCCT TCGGCCATTT CGGCCCCGCC
ATGCGCGCCA AGGCAGACCA GATCGCCGTG GTCTCGCGCT TCAAGTTCAC CCGCGAGCAG
ACGCTGCAGA CGACCGTGCA GTAG
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| Protein sequence | MKLPTALRSL STLQLALGVS IALHAGLFSF RFIDPERFDR VFQDTPLEVI LVNARANEQP
DKAQAIAQTS LAGGGEADKG RASSPMPYSA LTAVGDDFEE RQRQIDSMQE QQTVLLTQLR
KQVAALPPLD PREAAKQTKE QQAQQEKRQQ LVKLLAEIEK RINEENARPK KRYISPSTRE
AVYAIYYDGL RRKVEDKGTE NFPEQAGKKL YGELVMILTV NHDGRVLSTE IVQGSGNRLL
DTRAEAIARA AGPFGHFGPA MRAKADQIAV VSRFKFTREQ TLQTTVQ
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