| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1482 |
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| Symbol | aroE |
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| ID | 5747038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1658944 |
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| End bp | 1659801 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641296562 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001562511 |
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| Protein GI | 160896929 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00492116 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCCG CCGCCACCTC CTCCGACCGC TACTGCGTCA TGGGCAACCC CGTCGCGCAC
AGCCGTTCGC CCTGGATCCA TGCCCGCTTT GCCGAACTGT GCGGGCAGGA CCTGCACTAC
GAGCGCCAGC ATGTGGAGCT GCAAGGCTTT GCCGAGGCCG TGCGCGGCTT CGTCGCGGCA
GGCGGACGCG GCTGCAATGT CACCGTGCCC TTCAAGCTGG AAGCCGCACA GCTGGCCACC
ACCTCCAGCG AGCGCGTGCA ACTGGCCGGC GCCGCCAACA CCCTGGTGCT GGCGGCGGAC
GGCATCCATG CCGACAACAC CGACGGCCTG GGCCTGGTGG CCGACATCGT GCGCAATGCG
GGCGTGCCGC TGGCCGGGCG CGACCTGCTG CTGCTGGGCG CGGGTGGCGC CGCAGCCGGC
GCACTGGGCT CGCTGCTTGC CGAGCGCCCG CGCCGCATCG CCGTGGTCAA CCGCACCTTC
GAGCGCGCCC AGGCCCTGGT GCAGCGCCAT GCCGCCATCG CCGCGCACCA TGGCGTGGAA
CTGGTGGCGC TGGAGCAGCA GGCCGTGGAT GAGGATTTCG ACGTGGTCAT CAACGCCACC
GCCAGCAGCC TGGCCGGTGC CGAGGTGCCC GTGCCGGCCC GCGTGCTGCG GCCTGGCAGC
CTGGCCTACG ACATGATGTA CGGCGCCGCA GCCCAGGGCT TCCTGCAATG GGCCGAGCAC
CATGGCGCCC AGGCCCGCGA CGGGCTGGGC ATGCTGGTGG AGCAGGCGGC CGAATCGTTC
GCGCTGTGGC GCGGCGTGCG CCCCCCGTCG GCCCAGGTGC TGAACGAGCT GCGCGCCCAT
ATTGCTCAAG GCGGCTGA
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| Protein sequence | MTSAATSSDR YCVMGNPVAH SRSPWIHARF AELCGQDLHY ERQHVELQGF AEAVRGFVAA
GGRGCNVTVP FKLEAAQLAT TSSERVQLAG AANTLVLAAD GIHADNTDGL GLVADIVRNA
GVPLAGRDLL LLGAGGAAAG ALGSLLAERP RRIAVVNRTF ERAQALVQRH AAIAAHHGVE
LVALEQQAVD EDFDVVINAT ASSLAGAEVP VPARVLRPGS LAYDMMYGAA AQGFLQWAEH
HGAQARDGLG MLVEQAAESF ALWRGVRPPS AQVLNELRAH IAQGG
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