| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1481 |
|---|
| Symbol | |
|---|
| ID | 5747037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 1658220 |
|---|
| End bp | 1658936 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641296561 |
|---|
| Product | monofunctional biosynthetic peptidoglycan transglycosylase |
|---|
| Protein accession | YP_001562510 |
|---|
| Protein GI | 160896928 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
|---|
| TIGRFAM ID | [TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0317194 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCCC TGGCACGCGC CCTGCTGCTG GTGCTGTGCG CCGGCCTGCT GCTGCAGCTG
TTCTTTGTGC TGCGCATTGC GCTGATGGTG GTGGTCGATC CTGAATCCAC GGCCTTTCAG
CGCTCCGAGG CATGGCAGAT GCTGCGCAGC TCCGAAGGCC TGCACTGGAG CCAGCAATGG
CTGCCCTACG ACCGCATCGC GCCCACGCTC AAGCGCGCCG TCATCGCCTC CGAAGATGAC
AGCTTCACCG AACACCACGG GGTGCAATGG GAGGCCATCG AGAAGGCCTG GCAGCGCAAC
CAGCGCGCCG AAGCCCGTGC CCAGAAGGCA GACAACGGCA AGGCGCCCAA GATCTACGGC
GGCTCCACCA TCACCCAGCA GCTGGCCAAG AACCTGCTGC TGTCGGGCGA ACGCAGCCTG
CTGCGCAAGG GCCAGGAACT GGTGCTGACC CAGCTGCTGG AACTGATGCT GAGCAAGCAG
CGCATCCTGG AGATCTACCT CAACAGCGTG GAATGGGGCC AGGGCGTATT TGGCGCGGAG
GCTGCAGCCC GCCACTACTT TCGCAAGAGC GCCTCACAGC TCAGCGCGGC CGAGGCCGCA
CGCCTGGCCG TGATGCTGCC CCAGCCCAAA CGCTTCGAGA AGCTGCCCAA CTCCGGCTAT
CTGTTGCAGC GCACGCGCAC GGTCATGCAA AGAATGCCCA GCGCCGTCAT CCCCTGA
|
|---|
| Protein sequence | MKSLARALLL VLCAGLLLQL FFVLRIALMV VVDPESTAFQ RSEAWQMLRS SEGLHWSQQW
LPYDRIAPTL KRAVIASEDD SFTEHHGVQW EAIEKAWQRN QRAEARAQKA DNGKAPKIYG
GSTITQQLAK NLLLSGERSL LRKGQELVLT QLLELMLSKQ RILEIYLNSV EWGQGVFGAE
AAARHYFRKS ASQLSAAEAA RLAVMLPQPK RFEKLPNSGY LLQRTRTVMQ RMPSAVIP
|
|---|
| |