| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1472 |
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| Symbol | ddl |
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| ID | 5747028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1649383 |
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| End bp | 1650363 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641296552 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001562501 |
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| Protein GI | 160896919 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.269509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCT TCGGCACCCA GATCGATGTC AAGGCCCTGG GCAAGGTGGC CGTGCTGTTG
GGCGGCCGCT CGGCCGAGCG CGAGGTCTCG TTGATGTCGG GCACGGGCGT GCTCAAGGCC
CTGCTGTCGC ATGGCGTGGA CGCCCATGCC TTCGACCCCG CCGAGCGCGA CCTGGGCGAG
TTGAAGAAGG AAGGGTTCGA CCGCTGCTTC ATCGCGCTGC ACGGCCGCTA CGGCGAAGAC
GGCACGGTGC AGGGCGCGCT GGAGCTGCTG GGCATCCCGT ACACGGGCCC CGGCGTGATG
GCCTCGAGCA TCGCCATGGA CAAGATCATG ACCAAGCGCA TCTGGCGCTT CGAGGGCCTG
CCCACGCCGG ACTGGCGTCT GGTCGCCAGC GCAGGCGAGA CGCGCGCCGC GCTGCAGGCG
CTGGGCGCGC CCATGATCGT CAAGCCCTCG CGCGAGGGCT CGACCATCGG CCTGACCAAG
GTCTGGACGG CCGAGGAATG CGACCAGGCC TATGTGCTGG CCTCCCGCTA CGACCCCGAA
GTGCTCTGCG AAGAGTTCAT CGAGGGCGAC GAGACCACCT GCCCCGTGCT CGGCACGGGC
GAGGGCGCCC ATGCGCTGCC CGTGATCCGC ATCGTCGCCC CCGAAGGCAA CTACGACTAC
CAGAACAAGT ACTTCACCGA CGACACCAAG TACCACTGCC CCAGCGGACT GCCCGCCGAG
GAAGAGGCCG AGATCCGGCG CATCGTCGTG CGGGCCTTCC GCACGCTGGG CTGCCGCGGC
TGGTCGCGCG CCGACATCAT GATCCGCGCC AGCGATCGCA AGCCCTTCCT GCTGGAGATC
AACACCTCGC CGGGCATGAC GGGCCACTCG CTGGTGCCCA TGTCGGCCCG CGCCATCGGT
GTCAGCTACG AGAACCTCTG CCTGGGCATC CTGGCCAGCG CCGCGCTGGA CGCCGCGCAA
CCGGAGCAGG AGCACGCATG A
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| Protein sequence | MSGFGTQIDV KALGKVAVLL GGRSAEREVS LMSGTGVLKA LLSHGVDAHA FDPAERDLGE
LKKEGFDRCF IALHGRYGED GTVQGALELL GIPYTGPGVM ASSIAMDKIM TKRIWRFEGL
PTPDWRLVAS AGETRAALQA LGAPMIVKPS REGSTIGLTK VWTAEECDQA YVLASRYDPE
VLCEEFIEGD ETTCPVLGTG EGAHALPVIR IVAPEGNYDY QNKYFTDDTK YHCPSGLPAE
EEAEIRRIVV RAFRTLGCRG WSRADIMIRA SDRKPFLLEI NTSPGMTGHS LVPMSARAIG
VSYENLCLGI LASAALDAAQ PEQEHA
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