| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1468 |
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| Symbol | |
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| ID | 5747024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1643651 |
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| End bp | 1645603 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641296548 |
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| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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| Protein accession | YP_001562497 |
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| Protein GI | 160896915 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.747848 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCG AAGACTTCAA GACCGACCTC CACGCACTGC CGGCCACCGA GCCCGCCGTG
CCGGCGTCCC CTGCCGAGCT TGTCGAGCTG GCGGACCCGG CCGGAATGCC GGGCCTCGCT
CCCGAGGGGC AGGTGGTTGC GGACCCGGTC CTGGACGATT CACCGGCTCC CGCGCCAGCC
GGCGACGGCG AGGCGGAGCT TCCGGCCGCC GAGGTGTCGC AGTTGCCGCA GGTGCCTGTG
GCCTTGACCG AGCCCGTGCC CGACATCGCC ACGCTGACGG CGGCCAAGGA TGCTGCCGCC
TTCGTGGCCC AGATCTTTGC GGACCCCAGC ATCTCCGACT CCTCCGATGC CGAGGTCACG
CCCCTTGCCG CCGAAGAGGC GGTTGAATCC GAACAGGTGC TGCCGCCCGT GGCTGCCGGC
TGGCCCGGCG AGCAAGTCCA GCACCTGCAG GGCCAGCGCG TGCTCGTGCT GGGTCTGGGC
GCCTCGGGCC TGGCCATGGC ACGCTGGTGC GTGCGCTGCG GCGCCGAGGT CATCGTGGCC
GATACGCGCC AGGCGCCGCC CCAGCTGCAG CAGCTGTCCA ACGAATTGCC CCAGGTGCGC
TTCGTGCCCG GCGAGTTCAC GGCGCAGCTG GTGGACGGCC AGAGCCTGGG TCTGGTCTAC
CGCTCGCCCG GCCTGAGCCC GGCCGCCGTG GCGCCCGTGG TCGATGCCGC GCGCGCCCAG
GGCCTGCCCG TGGGCGGCGA GCTCGATCTC TTCGCCATGG CGCTCAAGGC TCTGTCCGCG
GCCCATGGCT ACCGTCCCAC GGTGCTGGGC ATCACCGGGA CCAATGGCAA GACCACGGTC
ACCTCGCTGA CCGGCCAACT GCTGGAGCAT GCGGGCCTGC GGGTGGCCGT GGCCGGCAAT
ATCGGCCCCA CGCTGCTGGA CACGCTGACC CAGGCCATCG ATGCCGAAAC GCTGCCCCAG
GCCTGGGTGC TGGAGCTGTC CAGCTTCCAG CTCGATGGCG TGCAGATGTT CGAGCCCACG
GCCGCCGCCG TGCTCAACAT CACCCAGGAC CACCTGGACT GGCACGGCAG CCTGCGCGCC
TATGCCGATG CCAAGGCCTG CATCTTCGGC AGCAGCGGCA CCATGGTGCT CAACCGCGAA
GACCCCGAGG TCATGCGCAT GCTGCCGGCG CCCGTGGTGC CGCCGGGCAA GCGCCAAAAG
CCCCAGCAGC GCGCCCACAT CACCTTCGGC GGCGACATGC CGCGCCGCCC CGGCGACTTC
GGCCTGGAAG TGGTCAGCGG CATGACGTGG CTGGTGCGCG CCCATGAGGC CGACGAAACC
GCCAAGGGCA AGAACGCCGA AGACCTGTAC ATCCAGCGCC TCATGCCTGC CGACGCACTG
CGCATCCGCG GCCGGCACAA CGCCATCAAC GCCCTGTCCG CCCTGGCCCT GGCCAGCGCG
GGCGGCTGCA CGCTGGCGCC GCTGCTCTAT GGACTGCGTG AGTACCGGGG CGAGCCGCAC
CGCGTCCAGC CCATTGGCCG CGTCAACGGC GTGGAGTACT ACGACGACAG CAAGGGCACG
AACGTGGGCG CCACCGTGGC CGCGCTGTCC GGCCTGGGCC CTGACCACCG CATCGTGGTC
ATCCTGGGTG GCGACGGCAA GGGCCAGGAT TTCTCTCCGC TGGTCGCGCC CGTGTCGCGC
CATGTGCGCA CGGCCGTGCT GATCGGCCGC GACGCCGGCC GCATCCGCGC CGCCCTGCAG
GACTGCGGCG TGCCCCTGGT CGATGCCACC ACCATGGCCG ACGCCGTGGA GCTGGCCGCT
TCGCGCGCCC ATGAGGGCGA TGCCGTGCTG CTGTCGCCCG CCTGTGCCAG CCTGGACATG
TTCCGCAACT ACGAGGACCG AGCCCACCAG TTCGTCGATG CCGTGCGCGC CTTGGCGCTG
GATGCCGGGC ATGAACTCGG AGGTGCTGCA TGA
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| Protein sequence | MNTEDFKTDL HALPATEPAV PASPAELVEL ADPAGMPGLA PEGQVVADPV LDDSPAPAPA
GDGEAELPAA EVSQLPQVPV ALTEPVPDIA TLTAAKDAAA FVAQIFADPS ISDSSDAEVT
PLAAEEAVES EQVLPPVAAG WPGEQVQHLQ GQRVLVLGLG ASGLAMARWC VRCGAEVIVA
DTRQAPPQLQ QLSNELPQVR FVPGEFTAQL VDGQSLGLVY RSPGLSPAAV APVVDAARAQ
GLPVGGELDL FAMALKALSA AHGYRPTVLG ITGTNGKTTV TSLTGQLLEH AGLRVAVAGN
IGPTLLDTLT QAIDAETLPQ AWVLELSSFQ LDGVQMFEPT AAAVLNITQD HLDWHGSLRA
YADAKACIFG SSGTMVLNRE DPEVMRMLPA PVVPPGKRQK PQQRAHITFG GDMPRRPGDF
GLEVVSGMTW LVRAHEADET AKGKNAEDLY IQRLMPADAL RIRGRHNAIN ALSALALASA
GGCTLAPLLY GLREYRGEPH RVQPIGRVNG VEYYDDSKGT NVGATVAALS GLGPDHRIVV
ILGGDGKGQD FSPLVAPVSR HVRTAVLIGR DAGRIRAALQ DCGVPLVDAT TMADAVELAA
SRAHEGDAVL LSPACASLDM FRNYEDRAHQ FVDAVRALAL DAGHELGGAA
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