| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1466 |
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| Symbol | |
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| ID | 5747022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1641062 |
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| End bp | 1642477 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641296546 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001562495 |
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| Protein GI | 160896913 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACCT TGCAACAAGC GCTGGAGCTG ATCCAGTCGC ATATCCCCCA GGCACGACTG
GTCGGCAACG GCCAGGCCGT GCTCACGCGC GTGCACACCG ACACCCGCAC GCTGCAGGCC
GGGGATCTGT TCGTCGCCTT GAAGGGCGAG CGTTTCGATG CCAACCAGTT CCTGGCCCAG
GCCCGCGAGG CCGGCGCTGC CGCAGCCCTG GCCCATGGCG GCCTGGAGGC CGCAGGCCTG
GCCGGCATCG AGGTGCCCGA TTCGCTGGCC GCCCTGGGCG CACTGGCCAC GGCCTGGCGC
GCGCGCTTTG CGCTGCCGCT GATTGCCGTC ACCGGCAGCA ACGGCAAGAC CACGGTCACG
CAGATGGTGG CCTCCATCCT GCGCGCCCAT GCGGGCGAGG CGGCCCTGGC CACGCGCGGC
AACTTCAACA ACTCCATCGG CCTGCCGCTG AGCCTGATGC GCATGACCGC CCAGCACCGC
GTGGCCGTGC TGGAGATGGG CATGAACCAT CCCGGCGAGA TTGCCGAGCT GGCCGCCATC
GGCCAGCCCA CGGTGGCCCT GGTCAACAAC GCGCAGCGCG AGCACCAGGA ATTCATGCAC
ACGGTCGAGG CCGTGGCGCG CGAGAACGGC AGCGTGCTGC TGTCCCTGCC CGCCGACGGC
GTGGCCGTGT TCCCGGCCGG CGACACCTAC ACGCCGCTGT GGCGCGAGCT GGCCGCTGCG
CGCCAGTGCC TGCTGTTCGG CGAGTCTGCC GATGGCGCCC AGGTCCATGC CCGCGATGCG
CTGTGGCTGG GCGATGCCTG GCAGTTCACC CTGGTCACTC CCGAGGGCGA GGCCCCGGTG
CGCCTGCACA TTGCCGGCCG CCACAACGTG CGCAATGCGC TGGCCGCTGC GGCCTGCGCC
CAGGCAGCCG GTGTGCCGCT GGCCGACATT GCACGCGGCC TGAGCGTGTT CGAGCCCGTG
CAGGGCCGCT CGCGCGCACT GGGCGTTTCG GTGCAGGGCC GCACGGTCAC CGTGATCGAC
GACAGCTACA ACGCCAATCC CGACTCGGTG GCCGCTGCCA TCGAGGTGCT GCGCGAACTG
CCCGCGCCCC AGCTGCTGGT GCTGGGCGAC ATGGGCGAGG TCGGCGACCA GGGGCCGCAA
TTCCATGCCG AGGCTGGCGC GCTGGCGCGC AGCCTGGGCA TTGCCCGGCT GTTCACGCTG
GGCGCGCAAA GCACATCCGC CGCCACCGCA TTCGGTGCAG GTGCGCGGCA TTTCGAAGAC
ATGGCCTCGC TGCAGCAGGC AGCCTGTGCC GCGCTGCCCG AGGTGGGCAG CATTCTGGTC
AAGGGTTCGA GGTTCATGAA GATGGAGCAG GTGGTTCAGG CGGTCGAGGC GGCCGGCAAG
GATGACGGTT GCAAGCAGGA GGCCGCATGC TGCTGA
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| Protein sequence | MMTLQQALEL IQSHIPQARL VGNGQAVLTR VHTDTRTLQA GDLFVALKGE RFDANQFLAQ
AREAGAAAAL AHGGLEAAGL AGIEVPDSLA ALGALATAWR ARFALPLIAV TGSNGKTTVT
QMVASILRAH AGEAALATRG NFNNSIGLPL SLMRMTAQHR VAVLEMGMNH PGEIAELAAI
GQPTVALVNN AQREHQEFMH TVEAVARENG SVLLSLPADG VAVFPAGDTY TPLWRELAAA
RQCLLFGESA DGAQVHARDA LWLGDAWQFT LVTPEGEAPV RLHIAGRHNV RNALAAAACA
QAAGVPLADI ARGLSVFEPV QGRSRALGVS VQGRTVTVID DSYNANPDSV AAAIEVLREL
PAPQLLVLGD MGEVGDQGPQ FHAEAGALAR SLGIARLFTL GAQSTSAATA FGAGARHFED
MASLQQAACA ALPEVGSILV KGSRFMKMEQ VVQAVEAAGK DDGCKQEAAC C
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