| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1465 |
|---|
| Symbol | murE |
|---|
| ID | 5747021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 1639536 |
|---|
| End bp | 1641065 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641296545 |
|---|
| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
|---|
| Protein accession | YP_001562494 |
|---|
| Protein GI | 160896912 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
|---|
| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCCT CCCAAGCCCT GCGGGTGCTG TCCACGGCCA CCGAGGCTGT CCAGTGGCTG
GCCGCCCGCC TGCAAGGCAG CGGCACGCTG CAGACCGACA GCCGCAAGGT CCGGCCCGGC
GACGCCTTCA TCGCCTGGCC CGGCGGGGCC ACCGATGGCC GCGCCCATGT GGCCTCGGCC
CTGGAGCGCG GTGCCATGGC CTGCCTGGTC GAAGCGCAGG GTGTCGAAGC CTTCGGTTTT
TCCGGCGAGC ACATCGCGGC GCTGCCCGGC CTCAAGGCCG CCACGGGCCT GATCGCCGAC
CAGTGGTTCC AGCACCCCAG CGCCCAGATC GACGTGCTGG CCGTGACCGG CACCAATGGC
AAGACCACCA CCGCCTGGTG GCTGGCGCAC GCGCTGGCCC AGGTGAAGCT GCAGGAACGC
AGCGGCTGCG CCCTGGTGGG CACGCTGGGC GTGGGCATTC CGCCCGCCAT GGAATCCACG
GGCATGACCA CGCCCGACCC GGTGCGGCTG CAGCGCGCGT TCCGCGAGTA CGCCGATGCG
GGCCTGGCGG CCTGCGCCAT CGAGGCCTCG TCCATCGGCA TCGTCGAGCA CCGGCTGGAC
GGCACGCGCA TCCGTGTGGC GCTGTTCACC AATTTCACGC AGGACCACCT CGACTACCAC
GGCAGCATGC AGGCCTACTG GGATGCCAAG GCCGCGCTGT TCGACTGGCC CGGCCTGCAG
GCCGCCGTCG TCAATGTGGA CGACGCGCAT GGCGCACGCC TGTGGGCCAC GCTGCAGTCG
CGCAAGCAGC CTGCCGCGCT CGACGTCTGG AGCATTTCCA TCGAAGGCGC GGCGCGCCTG
CAGGCCAAGG ACATTGCGCT GGGTGCCGAG GGCCTGAGCT TCACCGTGAT CGAGGCCGGC
CACAGCCTGC GCATGCACAC GCGCATGGTG GGTCAGTACA ACGTATCCAA CCTGCTGGGC
GTGCTGGCCG CGCTGCGCTG CCTGGGCCTG ACCCTGGACC AGGCCGTCGC CGCCTGCGTC
CACCTGGAGC CCGTGCCCGG CCGCATGCAG CAGATCGTCC AGCCCGGCCA GCCGCTGGTG
GCCGTGGACT ACGCCCACAC GCCCGATGCG CTGGACAAGG CCCTGCGCGC CCTGCGCCCG
GCCGCCGAGC AGCGCCGTGG CCGGCTGTGG TGCGTGTTCG GCTGCGGCGG CGACCGCGAT
GCCACCAAGC GGCCGCTCAT GGGGCAGGCC GCCCAGAAGA ATGCCGACTG TGTGCTGGTC
ACCAGCGACA ACCCGCGCAG CGAAGTGCCC GACCGCATCA TCGACCAGAT CCTGGCCGGC
ATGCAGCCGG GCGAGAACCT GCAGTCCCAG GCCGATCGCG CAGCGGCCAT CGCCCAGGCG
ATTGCGCACG CCAGCGAACG CGACGTGGTG CTGATCGCCG GCAAGGGACA TGAGGACTAC
CAGGAGACGG CGGGCCAGCG CCATCCGTTC TCCGACATGG CCGAGGCGCA CAAGGCGCTG
GCGGCCCGCG AAGGAAAGAA GCGGTCATGA
|
|---|
| Protein sequence | MSSSQALRVL STATEAVQWL AARLQGSGTL QTDSRKVRPG DAFIAWPGGA TDGRAHVASA
LERGAMACLV EAQGVEAFGF SGEHIAALPG LKAATGLIAD QWFQHPSAQI DVLAVTGTNG
KTTTAWWLAH ALAQVKLQER SGCALVGTLG VGIPPAMEST GMTTPDPVRL QRAFREYADA
GLAACAIEAS SIGIVEHRLD GTRIRVALFT NFTQDHLDYH GSMQAYWDAK AALFDWPGLQ
AAVVNVDDAH GARLWATLQS RKQPAALDVW SISIEGAARL QAKDIALGAE GLSFTVIEAG
HSLRMHTRMV GQYNVSNLLG VLAALRCLGL TLDQAVAACV HLEPVPGRMQ QIVQPGQPLV
AVDYAHTPDA LDKALRALRP AAEQRRGRLW CVFGCGGDRD ATKRPLMGQA AQKNADCVLV
TSDNPRSEVP DRIIDQILAG MQPGENLQSQ ADRAAAIAQA IAHASERDVV LIAGKGHEDY
QETAGQRHPF SDMAEAHKAL AAREGKKRS
|
|---|
| |