Gene Daci_1459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1459 
Symbol 
ID5747015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1633748 
End bp1634293 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content67% 
IMG OID641296539 
ProductATP-dependent protease peptidase subunit 
Protein accessionYP_001562488 
Protein GI160896906 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGT ATCACGGCAC CACCATCATC AGCGTGCGCC GGCAGACCCC CGAAGGCGTG 
CAGGTCGCCA TCGGCGGCGA TGGCCAGGTC ACATTGGGCA ACATCGTCGT CAAGGGCACC
GCGCGCAAGG TGCGCAAGCT CTACCACGGC AAGGTGCTTG CCGGCTTTGC CGGCGCCACG
GCAGACGCCT TCACGCTGTT CGAGCGCTTC GAGGCCAAGC TGGAAAAGCA CCAGGGTCAC
CTGACGCGCG CAGCCATCGA GCTGACCAAG GACTGGCGCA CCGACCGCGT GCTGCGCCGT
CTGGAGGCCA TGCTGGCGGT GGCCGACGCA TCGGCCTCGC TGATCATCAC CGGCAACGGC
GACGTGCTGG AGCCCGAGCA GGGCATCGTG TCCATCGGCT CGGGCGGCGC CTACGCGCAC
TCTGCGGCCA AGGCGCTGCT GACCAATACC GAGCTGTCGG CCGAGGAGAT CGTGCGCAAG
TCGCTGGCCA TCGCCGGCGA GCTGTGCATC TACACCAACA TGCACCACAC GGTCGAGACG
CTCTGA
 
Protein sequence
MEQYHGTTII SVRRQTPEGV QVAIGGDGQV TLGNIVVKGT ARKVRKLYHG KVLAGFAGAT 
ADAFTLFERF EAKLEKHQGH LTRAAIELTK DWRTDRVLRR LEAMLAVADA SASLIITGNG
DVLEPEQGIV SIGSGGAYAH SAAKALLTNT ELSAEEIVRK SLAIAGELCI YTNMHHTVET
L