Gene Daci_1456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1456 
Symbol 
ID5747012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1629616 
End bp1630770 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content63% 
IMG OID641296536 
Productcobalamin synthesis protein P47K 
Protein accessionYP_001562485 
Protein GI160896903 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGCTTC CCCTTGCTGA ATTTTCTGAA AGCAATCCCA TGGCACTGAT TCCCGTCACC 
ATCCTCACCG GCTTCCTGGG CTCGGGCAAG ACCACGCTGC TCAAGCGCGT GCTCAGCGAG
TCCCACGGCA TGAAGATCGC CGTGATCGAG AACGAGTTCG GCGAAGAGAA CATCGACACC
GACATCCTCA GGACGGAGTC CAAGGAGCAG ATCCTGCAGA TGAGCAACGG CTGCATCTGC
TGCACCATCC GCGAAGACCT GCGCGAAACC CTGCAGCTGC TGGCCGCCAA GCGCCGCAAG
GGCCTGGTGG AGTTCGACCG CATCGTGATC GAGACCACGG GCCTGGCCGA TCCCGGTCCC
GTCGCCCAGA CCTTCTTCAT GGACGACGAG ATCGCCGAGA CCTATCTGAT CGACTCCATC
CTCACCCTGG TCGATGCCAA GCACGCCAAC CAGCAGCTGG ACGACCGCCA GGAGGCGCGC
CGCCAGGTGG GCTTTGCCGA CCAGCTGTTC CTGTCCAAGA CCGACCTGGT CAGCGAGGAC
GAGAAGAACG CGCTCATCCA CCGCCTCAAG CACATGAACC CGCGCGCGCC CATCCGTGCC
GTGCATTTCG GCGAAGTGTC CCTGAACGAG GTCTTCGACC TGCGCGGCTT CAACCTCAAT
GCCAAGCTGG ACATCGATCC CGACTTCCTC AAGGAAGACG ACCACGACCA CGGACATGAC
CATGGCCACA AGCATGAGCA TGACGAGCAC TGCGGCCACG ACCATGGCCA TGAGCACGAC
GAGAACTGCG GGCACGACCA CGCCCATGAC CACGAGCATG GCGAGCACTG CAAGCATCCG
CACCACCATC ACCACGATGA CGACGTCAAG AGCTTCGTCT ACCGTGCCGA CCGTGCCTTT
GACCCTGCCC GCCTGGAGGA CTTCCTGGGC GCCATCGTCA ACATCTACGG CCCGCGCATG
CTGCGCTACA AGGGCGTGCT GAACATGCAG GGCACGGAGC GCAAGGTCAT TTTCCAGGGC
GTGCACCAGC TCATGGGCAG CGACCTGGGA CCGCAGTGGG CCGAGGGCGA AAAGCGCCAG
AGCAAGATGG TCTTCATTGG CATCGACCTG CCCCAGGACA TCTTCCTGCA GGGCCTGGAG
CAGTGCCTGG TCTGA
 
Protein sequence
MPLPLAEFSE SNPMALIPVT ILTGFLGSGK TTLLKRVLSE SHGMKIAVIE NEFGEENIDT 
DILRTESKEQ ILQMSNGCIC CTIREDLRET LQLLAAKRRK GLVEFDRIVI ETTGLADPGP
VAQTFFMDDE IAETYLIDSI LTLVDAKHAN QQLDDRQEAR RQVGFADQLF LSKTDLVSED
EKNALIHRLK HMNPRAPIRA VHFGEVSLNE VFDLRGFNLN AKLDIDPDFL KEDDHDHGHD
HGHKHEHDEH CGHDHGHEHD ENCGHDHAHD HEHGEHCKHP HHHHHDDDVK SFVYRADRAF
DPARLEDFLG AIVNIYGPRM LRYKGVLNMQ GTERKVIFQG VHQLMGSDLG PQWAEGEKRQ
SKMVFIGIDL PQDIFLQGLE QCLV