| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1450 |
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| Symbol | |
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| ID | 5747006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1622837 |
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| End bp | 1624159 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641296530 |
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| Product | anti-FecI sigma factor, FecR |
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| Protein accession | YP_001562479 |
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| Protein GI | 160896897 |
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| COG category | [K] Transcription
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
[COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.523851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCGC CCGCCTCTTC CTCTTCTTCC CTGCTGAGCA CCTTCCAGGA CAGCTACCAC
GAGCTGGTAC GCTTCGTGGC GCGCCGCGCC GGCCCGCAGG CCGCGCGTGA CCTGGTGCAT
GACGCCTGGA TACGCCTTGC CGAACGCCAG CGCGGCGAAA GCGATGCGCC CGCCGCGCCG
GACAGTCCGC CAGGCGCCAG CCGCGCCTAT CTCTACGCGG TGATGGAGAA CATCGCCATC
GACCACCTGC GCCATGGCCA GCGCACGGCC GAGCGCTTTG ACACCAGCGC GAGGGAAGGC
GAGCCGCCCT CCCCCCTCAG CCCCGATGTG GCCGACACCC ATTCCTACCG CCAGGCCCTG
GCCGGGGTCG AAGGCGCCCT GGCGCAGTTG CCCGCGCGCT GCCGCGACAT CTTCCTGGCC
GACCGCATCG AGGGCGCCTC GCATGCCGAG CTGGCCGAGC GCCACGGCGT CTCGGTCAAA
ACCGTGGAAC GCGAGGTCAT GCGCGCCATG GACAGCGTGG AAGCCGCGCT GCGCCGCTGG
CGCGGAGAAA CCGCCGCACC CGCACCACGC ACGGGCCGCC GCCGCGCCCT GTCCACCCTG
CTGGGGATGG CGGGCCTGGG TGTCGGCAGC CCGGCGATCT GGCTGGCCTG GCGCCAGTGG
ATGCCGCAGT ACCAGGTGCG GCTGGCCACG GCCACCGGCC GCCTGCTGAA CCAGCCCCTG
CCCGACGGCA GCAGCTTGAC GCTGGACGCC GCCAGCCGTG CCGAGGTGGA TTTCTACGCC
ACGCGCCGCC AGGTGCGGCT GCTGGCCGGC AGCGCCTTCT TCGCCGTGGC GCGCGACACG
GAATGGCCCT TCATGGTCCA GGCAGCGGAC GTACAGGTCA CCGTGCTGGG CACGCGCTTC
GAGGTGGCGC TGGAGGACGA TGCGGTGCTG GTCGCCGTCG ATGCGGGCCG CGTGCAGGTG
CGCGACGGCA GCGGCGCCCC GCATGAACTG GGCGCAGGCC AGATGCTGCG CCTGGCGCCA
GGCCAGACGG CCGCCGTGCA AACCGTTGCG GCGGTGGCCG CCTGGCGCGA GGGCTGGCTG
GACTTCCAGA ACACGCCGCT GGCCGAGGTG GTCCGGCGCC TGGAGCGCTA CAGCCTGCAG
CCACTGCGCG TGGAGCCCGA CGCCGCCGCC CTGCCCGTGC TGGGGCGCGT GCGCATTGCG
GCGGCCCAGG GCTGGCTGCG CATGCTGCCG CGCACCCTGC CAGTCAGCGT GCAGGAAGAG
GTGCAGGAAA AGGAGCAGGG CCCGGGAACC GGGCGCACCC TGGTCATCCG CCGCCGCAGC
TGA
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| Protein sequence | MPAPASSSSS LLSTFQDSYH ELVRFVARRA GPQAARDLVH DAWIRLAERQ RGESDAPAAP
DSPPGASRAY LYAVMENIAI DHLRHGQRTA ERFDTSAREG EPPSPLSPDV ADTHSYRQAL
AGVEGALAQL PARCRDIFLA DRIEGASHAE LAERHGVSVK TVEREVMRAM DSVEAALRRW
RGETAAPAPR TGRRRALSTL LGMAGLGVGS PAIWLAWRQW MPQYQVRLAT ATGRLLNQPL
PDGSSLTLDA ASRAEVDFYA TRRQVRLLAG SAFFAVARDT EWPFMVQAAD VQVTVLGTRF
EVALEDDAVL VAVDAGRVQV RDGSGAPHEL GAGQMLRLAP GQTAAVQTVA AVAAWREGWL
DFQNTPLAEV VRRLERYSLQ PLRVEPDAAA LPVLGRVRIA AAQGWLRMLP RTLPVSVQEE
VQEKEQGPGT GRTLVIRRRS
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