Gene Daci_1445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1445 
Symbol 
ID5747000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1615448 
End bp1616125 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content69% 
IMG OID641296524 
Producthypothetical protein 
Protein accessionYP_001562474 
Protein GI160896892 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.218218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGC AGTTCACCAC CCCCGAGGGC CAGACCTTCG CCCCTGAATT CGACACCCTG 
ATCGTCGCCG GCTGGGCCGG CCGCGACCGC GAGGCCATCG AGCACCACAT CGAGGAGCTG
GCCGCCATCG GCATCCCGCG CCCCAGCGCC GTGCCGCTGT ACTACCGCAT CTCCAGCAAC
CAGCTGAGCC AGCGCAGCGC GCTGCAGGTG CTGGGCGCGG ACTCCTCGGG CGAGGTCGAG
GTCTTCGTGT TCACGCACGA AGGCGAGATG TTCGTGAGCC TGGCCTCCGA CCACACGGAC
CGCAAGCTCG AGGCCTACAG CGTGGCCTTT TCCAAGCAGG CCTGCGTCAA GCCCGTGGCC
ACCCAGGCCT GGCGCTTTGC CGACGTGGCC GGCCACTGGG ATGAGCTGGT CGTGCGCTCG
TGGATCGTGG AAGACGGCCG CGAGGTGCTC TACCAGGAAG GCACGCTGGC CAGCCTGCGC
ACGCCCCAGG ACCTGATCGC AGGCTTCACG GGCGGCAAGG ATCTGCTGCC CGCAGGCTGC
GGCATGACCT GCGGCACGGT GGGCGCCATC GGTGGCATCC GCCCCTCGAC GCAGTTCTCC
ATGGAGCTGT ACGATCCCCG CAGCCGGCGT TCCATCCGCC ACAGCTACCG CAGCGAACTG
CTGGACGTCG TGGCCTGA
 
Protein sequence
MQLQFTTPEG QTFAPEFDTL IVAGWAGRDR EAIEHHIEEL AAIGIPRPSA VPLYYRISSN 
QLSQRSALQV LGADSSGEVE VFVFTHEGEM FVSLASDHTD RKLEAYSVAF SKQACVKPVA
TQAWRFADVA GHWDELVVRS WIVEDGREVL YQEGTLASLR TPQDLIAGFT GGKDLLPAGC
GMTCGTVGAI GGIRPSTQFS MELYDPRSRR SIRHSYRSEL LDVVA