Gene Daci_1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1438 
Symbol 
ID5746993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1606589 
End bp1607581 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content70% 
IMG OID641296517 
Producthypothetical protein 
Protein accessionYP_001562467 
Protein GI160896885 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.387267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTCC ATCTTCCCCG CCTGCCACGC CTGGCCCTTG CCCTGGCCGC CACCACCTTC 
GCCCTGGCCG CGCACGCCCA GGGCGGCTAC CCCGCCAAGC CGCTGACCTG GATCGTGCCC
TTCGCGGCCG GCGGCCCCAC GGACGCCATG GCGCGCGACA TCGCCCAGCG CACCAGCACC
CAGCTGGGCC AGCAGATCAT CATCGAGAAC GTTCCGGGTG CGGGCGGCAC CATCGGCGCG
GCCAAGGCGG CGCGCTCGGC GCCCGACGGC TACAGCTTCC TGGTCGGCCA CATGGGCTAC
ATGGGCGCGG CGCCGTCGCT GTACAAGAAG CTGGCCTATG ACCCGGTCAA GGACTTCGAG
GCGGTGTTCC GCTTCCCCGA CACGCCGCTG GTGCTGCTGG TGGGCAAGAA CTCCCCGTAC
AAGACGGCCG AGGAGTTGGT GGCCTTCGGC AAGCAGAACC CGGGCCGGCT GAACTTCGGC
AACGCGGGCG TGGGATCGAC CTCGCACCTG GTGGCGGCGC TGTTCGCCAG CCGCGCGCAG
ATGGAGATCA CCCAGGTGGC CTACAAGGGC GCGGCACCGG CCATGACCGA TGTGATCTCC
GGCCAGGTCG ATGCCATGTT CGACCAGACC AACACCGCCC TGCCCCAGCT GGCGGGCGAG
CGCATCCGCG CCATCGCCCT CACCTCGGAC AAGCCCATGC CCCAGTTCCC GGGCGCCGCC
GCCCTGGGCC AGAAGCTGCT GCCGGGCTTC GAGACCGCCA CCTGGTACGG CATCTACGCG
CCCAAGGGCA CGCCGCGCGA CGTGGTGCAA AAGGTCTACC AGGCCTATAC CAAGGCGCTG
GCCGACAAGG CCTGGACCGA CAGGATGGCC GCCCAGGGCA TACGCCTGCT GCCCGCAGAT
CAATACGCGC CCGAAGCCCT GGCACGCCAC ACGGCCGCCG AGGTGGAGCG CTGGCGCAAG
GTGGCGGCCG ACGCGAAGAT CTCGCTGGAC TGA
 
Protein sequence
MPFHLPRLPR LALALAATTF ALAAHAQGGY PAKPLTWIVP FAAGGPTDAM ARDIAQRTST 
QLGQQIIIEN VPGAGGTIGA AKAARSAPDG YSFLVGHMGY MGAAPSLYKK LAYDPVKDFE
AVFRFPDTPL VLLVGKNSPY KTAEELVAFG KQNPGRLNFG NAGVGSTSHL VAALFASRAQ
MEITQVAYKG AAPAMTDVIS GQVDAMFDQT NTALPQLAGE RIRAIALTSD KPMPQFPGAA
ALGQKLLPGF ETATWYGIYA PKGTPRDVVQ KVYQAYTKAL ADKAWTDRMA AQGIRLLPAD
QYAPEALARH TAAEVERWRK VAADAKISLD