| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1420 |
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| Symbol | |
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| ID | 5746975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1578634 |
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| End bp | 1580649 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641296499 |
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| Product | filamentous haemagglutinin outer membrane protein |
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| Protein accession | YP_001562449 |
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| Protein GI | 160896867 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.850328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGGC TGGCGACAGT ACCCGGTGCG TGGGGCGGCT GGCTATGCAA TATGAAGAAA
TCAATGGGAG GCGCCGCGCT TTGCGGTGCG CTGGGCGTCA TTGTCTGCGG TTGGGGAGCA
GTGGGGGAAG TCCGGTCTGA GGTGGTTTCC AGGGTCACGG CCCTGCCAGA TTCCGCCACG
CGGGTGAACA TGGGTGACGG TGGCCGCGTG CAGGTCACGC CGGCCCAGGT CACAGACGGT
GTTTCATACA ACGGCTTCAG CCAGTTCGAT GTGGGCAAGG CTGGACTTAC CTTCTTGAAT
GAGGGGGTCA AGGCGCGGAC CATCGTGGCG GAGGTTTTTT CCGCTGCGCC CTCGCATATC
ACAGGAACCA TCGATGTCAA TGGCCCCCGC GCCAATCTGA TTTTTGCGAA TCAGAACGGC
ATCCGCGTCA ATGGAGGCAG CTTCGTCAAT TTCGGCAGCG TTGCCCTGAC CACGGGCGCC
GTGACGCTGC GCGATCAATT GCAGCCTTCT GGCTATGTCC AGCGGCTGGT GGATGTCCAT
ACGAAGCAAG GCGAGATCGT GATTGGCGAG CAGGGGGTCA CCGGCAATCT GATCCGTCTG
GAGATGATTG CCAAGAGCAT TGCCCTGCAG GGTGCCGTCA CCAACGAGTT CTCATCATCA
AGTGCCCTGG TCCGCATGGT GGCCGGGGAA TCCACGGCCC AGTTCGATAC GGCGGCGTCG
CCCACGGACA ACTTGACGCC ATGGGTCTAC TACGAGGGAG GGAAGGCGCG CAGCACCGCA
TTGGCGGTGG ACCTGAATGC GGACTCCAAG GTCACCTCCG GGCGTATCGA GATTCTGGTG
ACCGACCAGG GCGCCGGCGT GCGCAACCAG GGGCAGATGG TGGCTTCCGC GGGGGATTTC
CGGCTGACCA GCACGGGCCA ACTGGAGCAG ATTGGAGGCA AGGTGCAGGC CCAGGGCCAG
GTGGACATAC GTTCCCAGGA AATCGTGCTC AGCTCGCGTG GGGAAGAAAG CAGCCTGCTG
GCGGCGGGCA GCCGCGTCCG GCTCCAGGCC GACGGATCCA TCCGCAACCT GGGTGGCGAG
ATATCCGGCC AGCAGGGCGT CGGCGACGCA GAGGATGCCC ATGCCGTCGT GCTCAAGGCC
GGCGGCGACA TAGAGCACCG GACGCCCGTC GGGGCCAGCA AGACCGCGCT GATTTTCGGC
AAGGAAGGCT CCGTGTTCCT GGACAGCGGG CGGGGCCTGG ACTCCGTCAA CGCGCGCATT
GTCTCCAACA GCGATCTGTT CATCCGAGGT GCTGCGGATG TGCGCAATGA AAGCGTGCAC
ATTGCGGGGG CAGGCCAGAG CGACTGGCAG TCGCACAGCG TCTTCAAGCG CAGAAAAGGC
TACAGCGTGG ACATGGGCGA GCTGGCCGAT CCTGCCAACC AGGCCTACTG GGTGGCGCAA
GGCAATGTGA AGGTCACGGC GCGCAACTTC TCCAACCTGG GCGGCCATGT GTTCTCCAAC
CAGGGCGGCA TCAAGATAGA GGCGCAAGAG AGCGTCGTGA CCAAGGCGCA CAGCATTGGC
GGGTTCGAGT ACCGGCAAAG CTGCTTCCTG TTCGTCTGCA GGCGCACAGC TTCCTCCAAT
GAGGCGCTGG TGGGCGGGCA GATCATGGGC GCCGAATCGG TCGATATACG TGCTGGCGGG
AAGATCCTCA ACGATGCCGG CCAGGTCTAC GCAGGCAAGG GAATGACCCT GGAGGCTCCC
GAGATCATCG CGCGAGGACG CCCCGTGCAT ACCGTCATCC TGCGCGACAA GGGGCTCAAG
GCGCTGTTCG GCGACACCTG GGCCAGGATC TATGCCACGG ACCTGGGCGG CAGCTACACC
GTCCAGCAAG GACGGCTGGT TCTCAAGGGG CTGGCATACC AGGACGGCGG GGTGTTGCAA
GCCTCCGAAG GCGTGGACGG CGCCATCGAC GTGATTCGCA AGCCTTCCCG CGATGCGGTG
CGCATCGAGG ACCACCTCGG CATCTTCTGG TGGTGA
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| Protein sequence | MDRLATVPGA WGGWLCNMKK SMGGAALCGA LGVIVCGWGA VGEVRSEVVS RVTALPDSAT
RVNMGDGGRV QVTPAQVTDG VSYNGFSQFD VGKAGLTFLN EGVKARTIVA EVFSAAPSHI
TGTIDVNGPR ANLIFANQNG IRVNGGSFVN FGSVALTTGA VTLRDQLQPS GYVQRLVDVH
TKQGEIVIGE QGVTGNLIRL EMIAKSIALQ GAVTNEFSSS SALVRMVAGE STAQFDTAAS
PTDNLTPWVY YEGGKARSTA LAVDLNADSK VTSGRIEILV TDQGAGVRNQ GQMVASAGDF
RLTSTGQLEQ IGGKVQAQGQ VDIRSQEIVL SSRGEESSLL AAGSRVRLQA DGSIRNLGGE
ISGQQGVGDA EDAHAVVLKA GGDIEHRTPV GASKTALIFG KEGSVFLDSG RGLDSVNARI
VSNSDLFIRG AADVRNESVH IAGAGQSDWQ SHSVFKRRKG YSVDMGELAD PANQAYWVAQ
GNVKVTARNF SNLGGHVFSN QGGIKIEAQE SVVTKAHSIG GFEYRQSCFL FVCRRTASSN
EALVGGQIMG AESVDIRAGG KILNDAGQVY AGKGMTLEAP EIIARGRPVH TVILRDKGLK
ALFGDTWARI YATDLGGSYT VQQGRLVLKG LAYQDGGVLQ ASEGVDGAID VIRKPSRDAV
RIEDHLGIFW W
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