| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1417 |
|---|
| Symbol | |
|---|
| ID | 5746972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 1574253 |
|---|
| End bp | 1575629 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641296496 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_001562446 |
|---|
| Protein GI | 160896864 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCACA CCAGCGCCGA GACAAAGCCT TCCTCCTCCC CGCGCACAGG CCTGCGCTCC
ATCGCCCTGG CCGGGCTGCT GGCCTGCGGC CTGCCACTGG CGGCCAGCGC CCAGGGGCTC
GATGCACAGG GCCTGGCGGC CCTGGATACC GCCATCCAGC CGCTGGCGCC CAAGATGGTG
GAGTGGCGCC GCGACATCCA CCAGCACCCC GAACTGTCGG GCCAGGAAGA ACGCACGGCC
AAGCTGGTGG CCGATCACCT GCGCCGCCTG GGCATGGAGG TGCAGACCGG CGTGGGCGGC
ACGGGCGTGG TGGGCGTGCT GCGCGGCAGC CAGCCCGGCA AGACCGTGGC GCTGCGTGCC
GACATGGATG CGCTGCCCGT GGCCGAGAAG ACCGGCCTGC CCTTTGCCTC CAAGGCCAAG
GCCCAGTACA TGGGCAAGGA GGTTTCGGTC ATGCATGCCT GCGGGCACGA TGCCCACGTG
GCCATGCTCA TGGGCGCGGC CGAGGCGCTG GCCGGCATGC GCGCGAAGCT GCCCGGCACG
GTGAAGTTCA TCTTCCAGCC CGCCGAGGAA GGCGCCCCGG TGGAGGCCGA TGCCCACGGC
CATGTGCCCA GCTTCGGTGC CAAGGCCATG GTGGAGGCCG GCGTGCTCAA GGACGTGCAG
GCCATCTACG GCCTGCACAT CACGGCCAAC CTGCCCTCGG GCATGGTGGG CTATCGCAGC
GGGCCGCTGA TGGCTGGTTC GGACAGTCTG AGCATCCAGG TCGAGGGCCG GGGCGGCCAT
GGCTCGTCGC CGTGGAATGC GGTCGATCCC ATCGTCGCGG CCAGCCAGGT GGTGCTGGGC
CTGCAGACCG TGGTCAGCCG CCAGCTCAAC ATCAGCCTGG AGCCGGCCGT GCTGACGATT
GGCTCCATCC AGGGCGGCAC GCGCTACAAC ATCATCCCGG ACAACGTGGA GATGCAGGGC
ACGCTGCGCA CCTTCGACGA GGACATGCGC CAGGAGGCAC ACAAGCGCAT CACCGCCACG
GCCGAGCAGA TCGCGGCCTC CAGCGGCGCC AAGGCCAAGG TGCGCTTCGG CCCCGTGGCC
TATCCGGTGA CCACCAACCC TGCCGCACTG ACCGAGGCCT CGCTGCCCGC GCTCAAGCTG
GCCATGGGCG GCAAGGCCAT GGTGATTCCC AAGGTCAGCG GCTCCGAGGA TTTCTCGGAG
TTCCAGAAGG TGGTGCCGGG CTTCTTCTAC TTCCTGGGCG CGCCGCCGGC AGGCCAGGAT
TTCGCCAAGG CGCCGTCCAA CCACTCGCCG CTTTTCGACA TCGACGAGAA GCAACTGCCC
ACGGGCGCGC GCTCACTGGC CGCGCTGGCC GTGGACTATC TGCAGCGCAA CCCATAG
|
|---|
| Protein sequence | MLHTSAETKP SSSPRTGLRS IALAGLLACG LPLAASAQGL DAQGLAALDT AIQPLAPKMV
EWRRDIHQHP ELSGQEERTA KLVADHLRRL GMEVQTGVGG TGVVGVLRGS QPGKTVALRA
DMDALPVAEK TGLPFASKAK AQYMGKEVSV MHACGHDAHV AMLMGAAEAL AGMRAKLPGT
VKFIFQPAEE GAPVEADAHG HVPSFGAKAM VEAGVLKDVQ AIYGLHITAN LPSGMVGYRS
GPLMAGSDSL SIQVEGRGGH GSSPWNAVDP IVAASQVVLG LQTVVSRQLN ISLEPAVLTI
GSIQGGTRYN IIPDNVEMQG TLRTFDEDMR QEAHKRITAT AEQIAASSGA KAKVRFGPVA
YPVTTNPAAL TEASLPALKL AMGGKAMVIP KVSGSEDFSE FQKVVPGFFY FLGAPPAGQD
FAKAPSNHSP LFDIDEKQLP TGARSLAALA VDYLQRNP
|
|---|
| |