Gene Daci_1413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1413 
Symbol 
ID5746968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1570626 
End bp1571339 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content59% 
IMG OID641296492 
ProductyecA family protein 
Protein accessionYP_001562442 
Protein GI160896860 
COG category[R] General function prediction only 
COG ID[COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA 
TIGRFAM ID[TIGR02292] yecA family protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACC CATTTGCTCC CTTGTCCGAG GAAGAGTTCG AAGAACTCGA CCACTTTCTG 
CTGTTCGGCA TTGACACGGA AGAAGGCATG ACCATGGACA TGGTCGATGG GTTCTTGCAC
GCCATTGCGG TCGGGCCGAC GACCGTGCAT CCCAAGCAAT GGCTGCCCAA GATCTGGGGT
ACCAAGGAGA TGATGCCTCC GATGGGTTCC ATCGAAGAGC TGAACCACAT GCTGGGCTTG
GTCATGCGCC ACTTCAACAC CATCATTGCC GGCCTGGGGG ATGATCCCCG GGAGATCAGC
CCGTGCTGGT CAACGATGGC CTACGACGGT GACGAGCGTG AATACGACGA CGCAGAATCG
TGGGCGTATG GCTTTGTCCA GGGGATGAGG CTTTGCTGGA AGGACTGGCA ACCGTTGCTG
TCCACTCCTC AAGGGCAAGC TTGGTTCAGA CCCATTGCCC TGCTGGGCGA AGACGACTAT
TCCGTGGACC AGGACGAACT CACCCGAACA CCGGCCATGC GATCGGAGCT GGCTCAACAA
ATCCCGCCGG CTGTTCTGGA CATGCACGCT CACTGGCTGC CACTTCGGCT CGCTGTCTAT
CAGCGGGAAG TGGCCAAGTC GATGCAGCCC AAGGTGGGGC GCAATGATCC GTGCCCTTGT
GGGAGCGGGG CGAAGTTCAA GAAGTGCTGT GGTGCTGCGG CCGATTTGCA CTGA
 
Protein sequence
MTDPFAPLSE EEFEELDHFL LFGIDTEEGM TMDMVDGFLH AIAVGPTTVH PKQWLPKIWG 
TKEMMPPMGS IEELNHMLGL VMRHFNTIIA GLGDDPREIS PCWSTMAYDG DEREYDDAES
WAYGFVQGMR LCWKDWQPLL STPQGQAWFR PIALLGEDDY SVDQDELTRT PAMRSELAQQ
IPPAVLDMHA HWLPLRLAVY QREVAKSMQP KVGRNDPCPC GSGAKFKKCC GAAADLH