| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1407 |
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| Symbol | |
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| ID | 5746962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1565126 |
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| End bp | 1566055 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641296486 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001562436 |
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| Protein GI | 160896854 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAATTC TGGTCAATAT CCACCCGAGC ATGGGCGCGC CCATCGTCGA CTCGCTGCGC
GCGCTGGCGC CCGGCGTGCA GGTCTGGGGC CACCGCGAGG AGGCGCCGGC CGACGCGGTC
GAGGCCATGC TCGCCTGGAG CCTCAAGCCG GGCGTGCTGC CGGCCTATCC GGGCCTGAAG
CTGCTGTGCG CACCCAGCGC GGGCGTGGAC AAGCTGCTGG CCGTGCCTGA TCTGCCGGCC
GGCCTGCCCG TGGCGCGCAC GGTCGATCCG CAGCAGCATG TGGAGATCGC ACAGTACGTG
GTCGGCACCG CGCTGCGCCA CACGCGCGAA CTGGACCTGT TCGCGCGCCA GCAGCAGGCC
GGCGACTGGC TGCGCCGCCC CGTGCGCGCC AGCGCAGACT GCCGCGTGGG CATCCTGGGC
CTGGGCGAGG TCGGCCGCTT CGTGGCCGGC GCCATGCAGG CCATCGGCTA CCCCGTCGTA
GGCTGGAGCC GCAGCGCCAA GAGCATTGCA GGCCTGGCCA CGCACAGCGG TGCCGAAGGT
CTGAAGCAGC TGCTGTCCAC CAGCGACATC CTGGTCTGCG CCTTGCCGCT CACGCCCGAG
ACGCGCGACC TGCTGGACCG CCGAACCCTG TCCCTGCTGC CGCGTGGCGC CTACTTCATC
AACGTGGGGC GCGGCGAACA GGTGGTGGAA GACGACCTGC TGGCCCTGCT CGACGAAGAC
CACCTGGCCG GCGCCGCGCT GGACGTGCTG CGCGACGAAC CGCCCCAGCC CGGCAACAAG
GTCTGGGGCC ATCCCAAGGC CTTTGTCACG CCGCACATCG CGGCCCAGGC CTCGGCCGAC
ACCGTGGCCC GCCAGTGCCT GGAGAACCTG CGCCGCCTGC GCGCAGGCGA GCCGCTGCTC
AACCTTGTGG ATGTGGCGCG GGGGTATTGA
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| Protein sequence | MGILVNIHPS MGAPIVDSLR ALAPGVQVWG HREEAPADAV EAMLAWSLKP GVLPAYPGLK
LLCAPSAGVD KLLAVPDLPA GLPVARTVDP QQHVEIAQYV VGTALRHTRE LDLFARQQQA
GDWLRRPVRA SADCRVGILG LGEVGRFVAG AMQAIGYPVV GWSRSAKSIA GLATHSGAEG
LKQLLSTSDI LVCALPLTPE TRDLLDRRTL SLLPRGAYFI NVGRGEQVVE DDLLALLDED
HLAGAALDVL RDEPPQPGNK VWGHPKAFVT PHIAAQASAD TVARQCLENL RRLRAGEPLL
NLVDVARGY
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