| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1406 |
|---|
| Symbol | |
|---|
| ID | 5746961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 1564347 |
|---|
| End bp | 1565117 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641296485 |
|---|
| Product | aldolase II superfamily protein |
|---|
| Protein accession | YP_001562435 |
|---|
| Protein GI | 160896853 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACG ACACCACGAT GTCCGAGGTC CGCCGCCAGG TGACGGCCGA GGAATGGCAG
ACCCGCATCG AGCTGGCCGC CGCCTACCGG CTGGTCGCCC ACTTCGGCTG GGACGACCTG
ATCTTCACCC ACATCTCGGC GCGCGTGCCG GGCCAGCCCG ACCAGTTCCT GATCAACCCC
TACGGCATGC TGTTCGACGA GATCACGGCC TCCAGCCTGG TCAAGGTCGA TCACGAGGGC
CGGCCGCTGA TGGAGACCGA GTACGACGTC AACCCGGCCG GCTTCGTCAT CCACAGCGCC
ATCCACGACG GCCGTCCCGA GGTGCAGTGC GTGCTGCACA CGCACACGCG CTACGGCGTG
GCCGTCTCGG CGCAGAAGGA AGGGCTGCTG CCCATCTCGC AGCAGTCCAT CTTCCCGCTG
GCGCGCCTGG CCTACCACGA CTACGAAGGC GTGGCCCTGC GCGACGACGA GAAGCCGCGC
CTGGTCGATG ACCTGGGCGC CAGCAACTTC CTCATCCTGC GCAACCACGG CCTGCTGACC
TGCGGCCGCA ACGTGGCCGA GGCCGTGCTG GCCATGTACA CGCTGGAGTC GGCCTGCCGC
ATCCAGATCC TGGCGCAGTC GGGCGGCGGC GAGCTCACGC GCATCCCGCA GGACATCATT
GCCGATGCGG TCAACCAGTC GCGCCAGGTC ACCAAGGGCA AGGGCGCAGG CCTGGCCTGG
CCCGGCCTGC TGCGCCGCCT GGACCGCATA GACCCTTCTT ACAAGGACTG A
|
|---|
| Protein sequence | MSNDTTMSEV RRQVTAEEWQ TRIELAAAYR LVAHFGWDDL IFTHISARVP GQPDQFLINP
YGMLFDEITA SSLVKVDHEG RPLMETEYDV NPAGFVIHSA IHDGRPEVQC VLHTHTRYGV
AVSAQKEGLL PISQQSIFPL ARLAYHDYEG VALRDDEKPR LVDDLGASNF LILRNHGLLT
CGRNVAEAVL AMYTLESACR IQILAQSGGG ELTRIPQDII ADAVNQSRQV TKGKGAGLAW
PGLLRRLDRI DPSYKD
|
|---|
| |