Gene Daci_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1387 
Symbol 
ID5746942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1544191 
End bp1545000 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content69% 
IMG OID641296466 
Productputative transmembrane protein 
Protein accessionYP_001562416 
Protein GI160896834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGTTTC CCATCGACTG GAATGCGCCC TGGCTGCAGG GGCTGCAAAC GCAGGGCAGG 
GCGGCCTGCC TGCAGGTGGC GCAGGGCCGG CCGGTCTGGC AGGCCTTGCA GTCACTGGCC
GACGCACAGG CGCTGCCCTG GCGCTTTGTG CCCCAGCACG ATCTGCCCGA AGGCACGGCC
TACGAGCAAT TCATCTTCGA GACGCGCTGC ATTCCCACGC GCGACAACCT GCATGACTTC
TTCAACGGCC TGATCTGGCT GCGCTGGCCC GCGCTCAAGC AGCGCTGCAA TGCCCTGCAG
GCCCGCGCCA TTGCCCAGGC GGGCGTGGGC GCGCAGCGCG GGCCGCTGCG CGATGCCGTC
ACCGTGCTGG ACGAGAACGG CGCCCTGCTG CTGGCGCCGG CCGCGCTGTG CGAGGCGCTG
CGCCACCGGC GCTGGCACCA GCTCTTCGTG GAGCAGCGCG CGCTGTGGCG CCAGGCCAGG
CTGCTGCCCA TAGGCCATGC GCTGCTGGAA AAGCTGGTGC AGCCGCGCAA GCCCATCACG
GCCCATGTGC TGTGCGTGCA CACGAATGGT GCAGGCGCCA CGGCAGGCCC CGCCACGGCG
GACATCGACG CCTGGCTGGC CGGCAGCATC TGGCTGGGGG CCGACACCCT GGCGTGCAAG
CCTTTTGCAC CCTTGCCCGT GCTGGGCGTG CCCGGCTGGT GGCGCGAGAA CGAGAACTTT
TCCTTCTATG ATGACTCTCT CGTGTTCCGG GCGCCCCGTT CCGCACAAGC ATCACAACAA
GGAATGGCAG CGGCGCAGGA CCCGGCTTGA
 
Protein sequence
MTFPIDWNAP WLQGLQTQGR AACLQVAQGR PVWQALQSLA DAQALPWRFV PQHDLPEGTA 
YEQFIFETRC IPTRDNLHDF FNGLIWLRWP ALKQRCNALQ ARAIAQAGVG AQRGPLRDAV
TVLDENGALL LAPAALCEAL RHRRWHQLFV EQRALWRQAR LLPIGHALLE KLVQPRKPIT
AHVLCVHTNG AGATAGPATA DIDAWLAGSI WLGADTLACK PFAPLPVLGV PGWWRENENF
SFYDDSLVFR APRSAQASQQ GMAAAQDPA