Gene Daci_1385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1385 
Symbol 
ID5746940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1542209 
End bp1543249 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content67% 
IMG OID641296464 
Productdihydroorotase 
Protein accessionYP_001562414 
Protein GI160896832 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0418] Dihydroorotase 
TIGRFAM ID[TIGR00856] dihydroorotase, homodimeric type 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCT CCACCAACAC CCTCACGATC ACCCGTCCCG ATGACTGGCA CCTGCACGTG 
CGCGATGGCG AAGCCATGCG CAGCGTGGTG CCGCATACGG CCGCGCAGTT TGCGCGCGCC
ATCATCATGC CCAACCTCAA GCCGCCGGTG ACCACCGCCG AGCAGGCGCT GGAGTACAAG
CAGCGCATCC TCTCGGCCGT GCCCGAGGGC ATGGCCTTCG AGCCGCTGAT GACGCTGTAC
CTCACCGACA ACCTGCCGCC CGAGGAAATC GTGCGCGCCA AGGCGGCCGG CGTCGTGGCC
TGCAAGCTCT ACCCGGCTGG CGCCACCACC AACAGCGACC ACGGCGTCAC CGACCTGCGC
AAGATCTACC CCACGCTGGA GGCCATGCAG CGCGAAGGCC TGCTGCTGCT GGTGCACGGC
GAAGTCACCA GCAGCGACAT CGACCTGTTC GACCGCGAGG CCGCCTTCAT CGACCAGCAC
CTGATCCCGC TGCGCCGCGA CTTCCCCGAA CTCAAGATCG TCTTCGAGCA CATCACCACG
CGCGAAGCCG CCCAGTACGT GACCGAGGCC GACCGCTTCG TGGGCGCCAC CATCACGCCC
CAGCATCTGC TGTTCAACCG CAACGCCATC TTCACGGGCG GCATCCGTCC GCACTACTAC
TGCCTGCCCG TGCTCAAGCG CGAGACGCAC CGCCTGGCCC TGGTGGAGGC GGCCACCAGC
GGCCTGCCCA AGTTCTTCCT GGGCACGGAC AGCGCGCCGC ACGCGGCCCA TCTCAAGGAA
CACGCCACCG GCTGCGCCGG CTGCTACAGC GCCCATGCCG CCATCGAGAT GTATGCCGAG
GCCTTCGACA ATGCCGGCGC GCTGGACAAG CTCGAAGCCT TCGCCAGCTT CAACGGCCCG
GACTTCTACA GCCTGCCGCG CAACACCGGC AAGATCACCC TGGTGCGCGA AAGCTGGACG
CCGCCGGACA GCTTCGCCTT CGGCGAGGCG CAACTGAAGC CGCTGCGCTC CGGCGAAGCC
TTGCCCTGGA AGCTGGTTTA A
 
Protein sequence
MTASTNTLTI TRPDDWHLHV RDGEAMRSVV PHTAAQFARA IIMPNLKPPV TTAEQALEYK 
QRILSAVPEG MAFEPLMTLY LTDNLPPEEI VRAKAAGVVA CKLYPAGATT NSDHGVTDLR
KIYPTLEAMQ REGLLLLVHG EVTSSDIDLF DREAAFIDQH LIPLRRDFPE LKIVFEHITT
REAAQYVTEA DRFVGATITP QHLLFNRNAI FTGGIRPHYY CLPVLKRETH RLALVEAATS
GLPKFFLGTD SAPHAAHLKE HATGCAGCYS AHAAIEMYAE AFDNAGALDK LEAFASFNGP
DFYSLPRNTG KITLVRESWT PPDSFAFGEA QLKPLRSGEA LPWKLV